PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G096400.1.p
Common NamePRUPE_ppa026513mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 277aa    MW: 29907.2 Da    PI: 9.4876
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G096400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.0002281103123
                         EEETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                         ++C++C + F ++  L  H++ H
  Prupe.3G096400.1.p  81 FSCNYCQRKFYSSQALGGHQNAH 103
                         89*****************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.86E-678108No hitNo description
PROSITE profilePS5015711.42781108IPR007087Zinc finger, C2H2
PROSITE patternPS00028083103IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009640Biological Processphotomorphogenesis
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
METQKPQMQQ AHDYHQEHPP QAPNTDILLD LSLSNKERDH GSNPELNLIN CFDSNASGNS  60
SPETSSPKGI TAHDAAEPRV FSCNYCQRKF YSSQALGGHQ NAHKRERTLA KKGHKSNCTA  120
ASADAVVRLP SLLSHRFSSM ASLPLHGSFN RSLGVQVHST IHKPCYQLSN TFGSTNTSLY  180
GGHNSNSNGC LRKSLDQQPA IGRLAVPQNN VFHVQGGVGS SSSSSSGGVG RFVNSTSVRK  240
FSPVTEGIGG LWWNSSVGHF KTKQDELQKL DLSLKL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G096400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007216706.20.0LOW QUALITY PROTEIN: zinc finger protein 1
TrEMBLM5XFR50.0M5XFR5_PRUPE; Uncharacterized protein
STRINGEMJ179050.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14393172
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.14e-42zinc-finger protein 1