PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.019G091900.1
Organism
Populus trichocarpa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 327aa    MW: 36421.6 Da    PI: 7.2771
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.019G091900.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.34.6e-10196238547
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                         +r +r   NR +A+rsR RK+++i eLe+ v +L++e + L  
  Potri.019G091900.1 196 RRVKRILANRQSAQRSRVRKLQYISELERCVTSLQGEVSVLSP 238
                         57799999***************************99877765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-13192256IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.151194243IPR004827Basic-leucine zipper domain
PfamPF001709.6E-9196240IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.8E-10196245No hitNo description
SuperFamilySSF579595.55E-10196246No hitNo description
CDDcd147032.62E-22197247No hitNo description
PROSITE patternPS000360199214IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MAQLPPKIPN VTPSWPDFSH KKLPITGIME TSPPRDDIIT AIVTNPSWVD EFLGFSSTRR  60
GTHRRSVSDS IAFREEAPTM LEKCRATGAP GLGSGHNSST DFDKFDDEQL MSMFNDDISN  120
AVAAPNSSST PSSPSDHNSI NDEKEAIVVA SKHKQQQKVR NENDEGQSPS EWETPTTVPT  180
ATDPAATSNE RKIDPRRVKR ILANRQSAQR SRVRKLQYIS ELERCVTSLQ GEVSVLSPRV  240
AYLDHRRLLL NVDNSALKQR IAALAQDKIF KDAHQEALKR EIERLRQVYH QQNLKMENTS  300
PPSASSTPSN DPTTPTTDKE QQLFQV*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.019G091900.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024446890.10.0basic leucine zipper 61
SwissprotQ9M2K41e-104BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A2K1WRW40.0A0A2K1WRW4_POPTR; Uncharacterized protein
STRINGPOPTR_0019s12170.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Representative plantOGRP12617181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.17e-95bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]