PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Potri.014G028200.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | bZIP | ||||||||
Protein Properties | Length: 412aa MW: 44007.3 Da PI: 9.3544 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.8 | 7.3e-16 | 329 | 379 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+aeN++L+k+ e+ ++ Potri.014G028200.1 329 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKAENEELQKKQAEMMEM 379 79***************************************9887777766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.3E-15 | 325 | 389 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.312 | 327 | 378 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.7E-13 | 329 | 380 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-11 | 329 | 379 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.6E-15 | 329 | 378 | No hit | No description |
CDD | cd14707 | 2.72E-27 | 329 | 383 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 332 | 347 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 412 aa Download sequence Send to blast |
MGTNFNFKSF TNDPSDAGGG RPPGNFPLAS QSSIYSLTLE ELQNTMGGSL GKDFGSMNMD 60 ELLKSIWSAE ETQTVATATS AGVQDGVGLQ RQGSLTLPRT LSLKTVDEVW KDMSKEYAIN 120 GTSAGVANNV PQRQPTLGEI TLEEFLVRAG VVREDIPVAA KINTNGGFFG DLSRLANNSS 180 AIGFQQNRGV GLNNNNTNQI SLQSSNLPLN GNGFRSNQAQ VQQQQQQQIF PKQPNMGYVT 240 QMPPQSSPGI RGGILGIGDQ GINSNLMQGG GMGVVGLGVA TGSPANQLSS DGIGKSNGDT 300 SSVSPVPYVF SGSGRGRRAG GAVEKVVERR QRRMIKNRES AARSRARKQA YTMELEAEVA 360 KLKAENEELQ KKQAEMMEMQ KNQVPNLSTT QNRTNNLTYL LITCLMASQC C* |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in roots, leaves, flowers and siliques but not in seeds. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Potri.014G028200.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | DQ487100 | 0.0 | DQ487100.1 Populus suaveolens abscisic acid responsive element-binding protein 2 (ABF2) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024441287.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1 | ||||
Swissprot | Q9M7Q4 | 1e-117 | AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | U5FRA9 | 0.0 | U5FRA9_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0014s02810.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1962 | 34 | 81 | Representative plant | OGRP3984 | 10 | 24 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G45249.1 | 1e-96 | abscisic acid responsive elements-binding factor 2 |
Link Out ? help Back to Top | |
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Phytozome | Potri.014G028200.1 |
Publications ? help Back to Top | |||
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