PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Potri.008G106700.1 | ||||||||
Common Name | POPTR_0008s10620g | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | bZIP | ||||||||
Protein Properties | Length: 144aa MW: 16358.6 Da PI: 10.1246 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 26.1 | 1.8e-08 | 25 | 52 | 5 | 32 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLe 32 kr +r+++NRe+ArrsR ++++ + L Potri.008G106700.1 25 KRRKRMISNRESARRSRMKRQKHLGGLV 52 9********************9876665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.7E-7 | 20 | 105 | No hit | No description |
SMART | SM00338 | 4.5E-5 | 21 | 92 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.77E-8 | 25 | 76 | No hit | No description |
Pfam | PF00170 | 1.6E-6 | 25 | 59 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 4.44E-11 | 26 | 76 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 28 | 43 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence Send to blast |
MSSSLAKAGS SGSDVDAPNA TIDEKRRKRM ISNRESARRS RMKRQKHLGG LVSEKSILER 60 KIYEDNEKYV AIWQSHFALE SQNKILRDEK MKLAENLKNL QQILSGYEVP ESDQDIEVSD 120 RFLNPWQVSS PVKPITASGM FKF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 38 | 43 | RSRMKR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Potri.008G106700.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002312336.2 | 1e-101 | bZIP transcription factor 53 | ||||
TrEMBL | B9HIQ0 | 1e-100 | B9HIQ0_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0008s10620.1 | 1e-101 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15536 | 8 | 12 | Representative plant | OGRP13793 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G62420.1 | 7e-25 | basic region/leucine zipper motif 53 |
Link Out ? help Back to Top | |
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Phytozome | Potri.008G106700.1 |
Entrez Gene | 7471112 |