PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.011G024700.1
Common NamePHAVU_011G024700g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family NAC
Protein Properties Length: 304aa    MW: 34558.7 Da    PI: 8.5751
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.011G024700.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM151.93e-47151422128
                 NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                          pGfrFhPt+eel+++yLk+ v gkkl+  +vi  ++iy+++PwdLp  +k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++
  Phvul.011G024700.1  15 LPGFRFHPTEEELLDFYLKNMVVGKKLRY-DVIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDRKHGSGGRPNRTTEKGFWKATGSDRKI 104
                         59**************************9.99***************8888899************************************* PP

                 NAM  93 lsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         ++    ++ +gl+ktLvfy grap+g+ktdWvm+eyrl
  Phvul.011G024700.1 105 VTLsdPKRIIGLRKTLVFYMGRAPSGRKTDWVMNEYRL 142
                         987666778***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.19E-575160IPR003441NAC domain
PROSITE profilePS5100554.03914160IPR003441NAC domain
PfamPF023651.5E-2516142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0010200Biological Processresponse to chitin
GO:0045792Biological Processnegative regulation of cell size
GO:0048281Biological Processinflorescence morphogenesis
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MATMEDIAMS SEIALPGFRF HPTEEELLDF YLKNMVVGKK LRYDVIGFLN IYHHDPWDLP  60
GLAKVGEREW YFFVPRDRKH GSGGRPNRTT EKGFWKATGS DRKIVTLSDP KRIIGLRKTL  120
VFYMGRAPSG RKTDWVMNEY RLPDNCKLPK EIVLCKIYRK ATSLKVLEER AEREMKQMVG  180
SPASPPSSTD TMSFSSPQEE QNVPLPLPLL QNVLKKESES EEMAPCVANM TVPKQEKGSN  240
QLGLKDTSKG SCGTSSLQMP FGKDNLPDLQ LPMLTDWTQD TFWAQLNSPW LQNFTPSNIL  300
NFY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-4311601168Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.011G024700.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150391e-117AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007131576.10.0hypothetical protein PHAVU_011G024700g
SwissprotQ10S659e-93NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLV7AE900.0V7AE90_PHAVU; Uncharacterized protein
STRINGXP_007131576.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF62143251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-116NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]