PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Phvul.007G214300.1 | ||||||||
Common Name | PHAVU_007G214300g | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family | bZIP | ||||||||
Protein Properties | Length: 150aa MW: 16661.9 Da PI: 6.8138 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.7 | 2.6e-13 | 23 | 78 | 5 | 60 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 ++ +r+++NRe+ArrsR RK++++e L+e++ L++eN aL++ ++ k+ + +++ Phvul.007G214300.1 23 RKRKRMESNRESARRSRMRKQKQLETLTEEASRLQSENAALAQSIKAKKEAYVEME 78 5789******************************************9999887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-10 | 17 | 73 | No hit | No description |
SMART | SM00338 | 1.0E-11 | 19 | 83 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.611 | 21 | 68 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.5E-10 | 23 | 76 | No hit | No description |
Pfam | PF00170 | 6.1E-11 | 23 | 78 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.32E-16 | 24 | 74 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 26 | 41 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence Send to blast |
MASIQRPASS GSSEGGDPAV NERKRKRMES NRESARRSRM RKQKQLETLT EEASRLQSEN 60 AALAQSIKAK KEAYVEMEAG NDIIRAQTME LADRLRFLNS ILEIAEAAGD LSVEIPQIPD 120 HLFNPWQIPH PMMASPDMFL HGIQGLFAS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 22 | 43 | RKRKRMESNRESARRSRMRKQK |
2 | 35 | 42 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds DNA to the C-box-like motif (5'-TGCTGACGTCA-3'), ABRE elements, G-box-like motif (5'-CCACGTGGCC-3'), DOF (5'-AAAG-3'), I-box (5'-GATAA-3'), BS1 (5'-AGCGGG-3'), MY3 (5'-CGACG-3'), 5'-CAGTGCGC-3' and 5'-ACTCAT-3' sequence in target gene promoters (PubMed:15047879, PubMed:16810321, PubMed:19531597, PubMed:21278122, PubMed:25108460). DNA-binding and subsequent transcription activation is triggered by heterodimerization with other bZIP proteins (e.g. BZIP1, BZIP10 and BZIP25) (PubMed:16810321, PubMed:19531597, PubMed:21278122). Promotes POX1/PRODH1 expression in response to hypoosmolarity stress (PubMed:15047879, PubMed:16810321). Transcriptional activator of seed maturation (MAT) genes (e.g. AT2S2), including seed storage protein (SSP) and late embryogenesis abundant (LEA) genes (PubMed:19531597). Activated by low energy stress both by transcriptional and post-transcriptional mechanisms. Promotes dark-induced senescence and participates in the transcriptional reprogramming of amino acid metabolism during the dark-induced starvation response, especially when heterodimerized with BZIP1, by triggering accumulation of sepcific proteins including ASN1 and POX1/PRODH1 (PubMed:21278122). {ECO:0000269|PubMed:15047879, ECO:0000269|PubMed:16810321, ECO:0000269|PubMed:19531597, ECO:0000269|PubMed:21278122, ECO:0000269|PubMed:25108460}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Phvul.007G214300.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By hypoosmolarity (PubMed:15047879, PubMed:16810321). Accumulates during dark-induced starvation (PubMed:21278122). {ECO:0000269|PubMed:15047879, ECO:0000269|PubMed:16810321, ECO:0000269|PubMed:21278122}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015041 | 1e-166 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007145149.1 | 1e-105 | hypothetical protein PHAVU_007G214300g | ||||
Swissprot | Q9LZP8 | 1e-39 | BZP53_ARATH; bZIP transcription factor 53 | ||||
TrEMBL | V7BJE2 | 1e-104 | V7BJE2_PHAVU; Uncharacterized protein | ||||
STRING | XP_007145149.1 | 1e-105 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4202 | 34 | 60 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G62420.1 | 4e-42 | basic region/leucine zipper motif 53 |
Link Out ? help Back to Top | |
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Phytozome | Phvul.007G214300.1 |
Entrez Gene | 18626610 |
Publications ? help Back to Top | |||
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