PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.001G029500.1
Common NamePHAVU_001G029500g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 141aa    MW: 16594.9 Da    PI: 11.0402
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.001G029500.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.86.2e-1057101549
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                         ++ rr+q+NRe+ArrsR RKk  +e+L++    +  eN++Lk++l
  Phvul.001G029500.1  57 RKLRRMQSNRESARRSRWRKKRHLENLTNQQNRFRMENRELKNRL 101
                         5789**************************************876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.3E-652101No hitNo description
SMARTSM003381.4E-753117IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.61155101IPR004827Basic-leucine zipper domain
PfamPF001702.2E-757101IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-1057109No hitNo description
CDDcd147021.05E-1258107No hitNo description
PROSITE patternPS0003606075IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
MFFHQEPEPV HSSCFPVLQT MFTPAEIEEL FSLVNEPPSP ESGSQGSNRA VRSTHERKLR  60
RMQSNRESAR RSRWRKKRHL ENLTNQQNRF RMENRELKNR LFLTMHQNLL LSVENERLRS  120
ESLTLMATLS NLYQILGISQ *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.001G029500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150361e-141AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007160935.17e-97hypothetical protein PHAVU_001G029500g
TrEMBLV7CS182e-95V7CS18_PHAVU; Uncharacterized protein
STRINGXP_007160935.13e-96(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59963052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.12e-18basic leucine-zipper 5