PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf08862g00002.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Trihelix
Protein Properties Length: 363aa    MW: 41841.5 Da    PI: 7.0231
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf08862g00002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix59.49e-1940122286
                  trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf...erspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 
                               Wt+qe+  Li+a++e++ +l++g+lk+ +Weev++ + ++ gf   ++s++qC++k+e+l+kry++++   + +      +++yf
  Peinf101Scf08862g00002.1  40 WTHQETFNLIQAYQEKWYSLKKGQLKASQWEEVAITVaARCGFdepSKSATQCRHKIEKLRKRYRAERLKPGPN------SWQYF 118
                               ***********************************9966667766579*****************998776652......47777 PP

                  trihelix  83 dqle 86 
                                 ++
  Peinf101Scf08862g00002.1 119 GLMD 122
                               6665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.0E-1939124No hitNo description
PROSITE profilePS500906.2639100IPR017877Myb-like domain
SMARTSM005957.5E-647129IPR006578MADF domain
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MSTPSSPPSP LLLPPPESTY PHPQISPIPS PIKKVQPIPW THQETFNLIQ AYQEKWYSLK  60
KGQLKASQWE EVAITVAARC GFDEPSKSAT QCRHKIEKLR KRYRAERLKP GPNSWQYFGL  120
MDQMERGPLP IAAHPVAMVK CQQNNSNNSN SNDHHPRYIL DSDSDEVDVN FMKNKSRSIN  180
NIVLGGMSMN IDNRNVSKLA KDRNFVGEMG MMGGVNVVET NRNVNRMAKD RNFGGEMGMM  240
GGVHVVDHRN VVKDRNFNVM RGMRNNPMNE KRQGYFENVE MEDEEEEEVD EEEDEESVGG  300
SELAAEIRSF AERFMRMEHK KIEMMKETER YRMEMERRRM EMILETQRSL VDTITSVVGA  360
NKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006352691.11e-146PREDICTED: uncharacterized protein LOC102598294
TrEMBLM1BS751e-145M1BS75_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000517881e-145(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA124661516
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24860.12e-26Trihelix family protein