PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02877g00033.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 574aa    MW: 64439.5 Da    PI: 4.7464
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02877g00033.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1479.8e-4611227128
                       NAM   7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                               FhPtdeelv +yLkkk+ +k++ l +vi+ +d+yk++P+dLp  +k+k+++++w+fFs+rd+ky++g r+nr tk+g Wk tgkd
  Peinf101Scf02877g00033.1   1 FHPTDEELVLYYLKKKICRKRILL-DVIAVTDVYKWDPQDLPdiSKLKTGDRQWFFFSPRDRKYPNGARSNRGTKHGHWKVTGKD 84 
                               9********************999.99**************96559999************************************ PP

                       NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               +++ + ++++vg+kktLvfykgrap ge+tdWvmhey++
  Peinf101Scf02877g00033.1  85 RTISC-NSRAVGVKKTLVFYKGRAPLGERTDWVMHEYTM 122
                               *****.999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.28E-521145IPR003441NAC domain
PfamPF023653.8E-221121IPR003441NAC domain
PROSITE profilePS5100550.5461145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    Send to blast
FHPTDEELVL YYLKKKICRK RILLDVIAVT DVYKWDPQDL PDISKLKTGD RQWFFFSPRD  60
RKYPNGARSN RGTKHGHWKV TGKDRTISCN SRAVGVKKTL VFYKGRAPLG ERTDWVMHEY  120
TMDEEELKRC QDAHDYYALY KVFKKSGAGP KNGEQYGAPF REEDWDNDEC LSAEGFVNPD  180
SSIKHVNEVP SVDGALDDLN HVADEPVVVE PLSVDYDYAL EQLIHEEDTE STLLGQSAGE  240
VNLPNHSTVF VPSCQQYYAR ESFDLTQSGT SQLQLHGTPE VTSAPVSHEP QRHVVEEDFI  300
EDFLEMDDLL GPEPNAQHFD NPELGVQNFD MAGPSGQNFD KPIGNLENLQ FDYLDGLTEF  360
DLYHDAPLLF DDLRTTEVGQ ITEPYANSFV NGAVYPASTT YLSTFQNEMM NNQPMHLNNG  420
EHSNQRWTHD QRFNIFHPSD ANQMVVPSAT SGVVYDSNLP NHPNHNEIAK QDDGTPSWLS  480
SQLWAFVDSI PTTPAAAAES PLVNSAFKRM SSFSRVRINP GNMNVVAGNS SATSSKSGKS  540
KNGVIYFSFL GIFFAIVCLL VGTFVAVLGR HISS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-41112221140Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF5098690.0AF509869.1 Petunia x hybrida nam-like protein 6 (NH6) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018629764.10.0PREDICTED: NAC domain-containing protein 17-like isoform X2
TrEMBLQ8LRL90.0Q8LRL9_PETHY; Nam-like protein 6
STRINGXP_009613291.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32122451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.11e-114NAC domain containing protein 17