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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf02666g00014.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
bHLH |
Protein Properties |
Length: 423aa MW: 46281 Da PI: 5.5308 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf02666g00014.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 11.2 | 0.00069 | 384 | 405 | 34 | 55 |
TTS-STCHHHHHHHHHHHHHHH CS
HLH 34 pskKlsKaeiLekAveYIksLq 55
+ + a++L Av+YIk+L+
Peinf101Scf02666g00014.1 384 AERQTNTADMLDFAVDYIKELE 405
344599*************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 423 aa
Download sequence Send
to blast |
MDQSRFQQQP MTSGLTRYRS APSSYFSSLL SNNPTSASGG SASGIISGGC GYARDDFMQN 60 SNNSSSDIEQ VFARFVASID NRDSNSGSLV SNQQNLENPS NMNVRSDFIV PKQEVKLSRQ 120 PLARQRSCDY SLVSQMNYES QVKRSKFVSS VKQEPRETLQ QLQQQPQQQS TDQQIDTSVV 180 DNSFVFTSSM NSARLTPVSI GGGGAGSGNS NLARYNSSPA GFFAQINIEN EYGIRGTGSY 240 GTGTSARTEA SLSTPRRTQV GFSTGKPPAS PGLMPPISEI GDKGVEESST SNERKNDESC 300 ITDTDFPMPS WEDSHILSDD FLKAEDIEIE PFSNQNNEGL ARPPLPLAHH MSLPTSTMEK 360 LLQDSVPLNV RAKRGCATHP RSIAERQTNT ADMLDFAVDY IKELEKQVKI LAERRAKCTC 420 TNK
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975523 | 2e-48 | HG975523.1 Solanum lycopersicum chromosome ch11, complete genome. |