PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf01611g02006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | NAC | ||||||||
Protein Properties | Length: 112aa MW: 12904.3 Da PI: 4.8893 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 31.9 | 4e-10 | 31 | 57 | 1 | 27 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk 27 + pGfrF Ptdeel+++yLkkkveg + Peinf101Scf01611g02006.1 31 MFPGFRFCPTDEELISYYLKKKVEGVD 57 579********************9977 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.22E-9 | 27 | 62 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 10.774 | 31 | 112 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.0E-8 | 33 | 97 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 112 aa Download sequence Send to blast |
MEDGHDVSAG FTNESSDEKN VEISIATAST MFPGFRFCPT DEELISYYLK KKVEGVDKFQ 60 IVAHSYSNLA VRHIQYDRED DDRNTIISLN KYMLSTRRNH SGYLTYFVGY DV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019250218.1 | 5e-19 | PREDICTED: NAC domain-containing protein 40-like | ||||
TrEMBL | A0A1J6IT19 | 1e-17 | A0A1J6IT19_NICAT; Nac domain-containing protein 60 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4154 | 22 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27300.1 | 8e-11 | NTM1-like 8 |