PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00793g12004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | FAR1 | ||||||||
Protein Properties | Length: 137aa MW: 15953 Da PI: 8.0729 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 89 | 6.5e-28 | 11 | 100 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 ++YneYA +GFsvr+++ +k++ +g +++r+++C+keg+r+++k++ ++++r+etrtgC a++ v+++++g++++++le+eH Peinf101Scf00793g12004.1 11 DYYNEYAVAIGFSVRNEYANKNRVQGYVISRKLTCYKEGYRDKDKRD-AATQKHRKETRTGCLAHIIVSRQSNGRFCIISLEEEH 94 69******************************************999.9999********************************* PP FAR1 86 nHelap 91 nH+l+p Peinf101Scf00793g12004.1 95 NHPLVP 100 ****86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 6.0E-25 | 11 | 100 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence Send to blast |
MEFDSEEHAY DYYNEYAVAI GFSVRNEYAN KNRVQGYVIS RKLTCYKEGY RDKDKRDAAT 60 QKHRKETRTG CLAHIIVSRQ SNGRFCIISL EEEHNHPLVP SSLAHMLPPQ RKIKVAQAYE 120 IDLLDDSGIR LKIVYDI |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016463957.1 | 2e-72 | PREDICTED: protein FAR1-RELATED SEQUENCE 5-like | ||||
Refseq | XP_018631664.1 | 9e-75 | PREDICTED: protein FAR1-RELATED SEQUENCE 5-like | ||||
TrEMBL | A0A1S3ZI80 | 6e-71 | A0A1S3ZI80_TOBAC; protein FAR1-RELATED SEQUENCE 5-like | ||||
STRING | XP_009619707.1 | 4e-72 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3021 | 17 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 7e-24 | FAR1 family protein |