PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00256g12020.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 337aa    MW: 37664.9 Da    PI: 7.2117
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00256g12020.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY932.2e-29167227160
                               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                               ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs e++++++ tYegeHnh+k
  Peinf101Scf00256g12020.1 167 VKDGYQWRKYGQKVTRDNPYPRAYFKCSFApSCPVKKKVQRSLENQSIIVATYEGEHNHSK 227
                               58***************************99****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.4E-28160228IPR003657WRKY domain
PROSITE profilePS5081125.201162228IPR003657WRKY domain
SuperFamilySSF1182907.98E-25163226IPR003657WRKY domain
SMARTSM007741.9E-33167227IPR003657WRKY domain
PfamPF031067.6E-24168225IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MEFFLLDTSL ELNSRPLPIL DEVPKQEMQS NFIGLGRDMM PANNEAGDLK EELSRVSAEN  60
KKLTEILSVM CDNYIALRNQ LMEYRRQLQN GNIGVDDISA AGSRKRKAAE STSSPNNIVV  120
HHGHYTESSS SDNEDSSCKK PRVLEHIKAK ISTVYVRNQG SATTLIVKDG YQWRKYGQKV  180
TRDNPYPRAY FKCSFAPSCP VKKKVQRSLE NQSIIVATYE GEHNHSKVQD AGDSDYSVHC  240
STSLNTSGQN NFLLDHTEPK ALFVNGNGNM NSTTSTTTAD THSHRSSSGG DDHHRPEFHQ  300
LLIEQMAASL TKDPSFNAAL TAAFQEKILQ HNQTDKR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-191662251371WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001312579.11e-118probable WRKY transcription factor 40
TrEMBLD3GDP71e-117D3GDP7_SOLLC; JA-induced WRKY protein
STRINGXP_009764801.11e-117(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28552450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.14e-73WRKY DNA-binding protein 40