PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00071g01019.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 583aa    MW: 63112.7 Da    PI: 6.6929
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00071g01019.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.12.7e-31228285260
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                               dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk  ers  +++++ei+Y+g+H+h+k
  Peinf101Scf00071g01019.1 228 DDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSP-EGQITEIVYKGSHDHPK 285
                               8****************************************.***************85 PP
2WRKY106.21.7e-33399457159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
  Peinf101Scf00071g01019.1 399 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 457
                               59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.8E-26217286IPR003657WRKY domain
PROSITE profilePS5081122.102222286IPR003657WRKY domain
SuperFamilySSF1182902.62E-24225286IPR003657WRKY domain
SMARTSM007743.4E-33227285IPR003657WRKY domain
PfamPF031069.0E-24228284IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.4E-37384459IPR003657WRKY domain
SuperFamilySSF1182902.35E-29391459IPR003657WRKY domain
PROSITE profilePS5081138.825394459IPR003657WRKY domain
SMARTSM007743.1E-39399458IPR003657WRKY domain
PfamPF031063.5E-26400457IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 583 aa     Download sequence    Send to blast
MEEDSQSHTH SHSHQHQYTH SGAAVGAKYK LMSPAKLPIS RSACITIPPG LSPSSFLESP  60
VLLSNIKAEP SPTTGSFSKF QLMQGSSRSA AFSMMRSCSS ENAYGETTGE FEFKFATGSG  120
STSGSLTAEA AISAGLNQQQ SESLNQDQDR CLSQSSASSA LAKNEMPNSK EPSLPAPVSL  180
DASSISTAAA AAAIDTEENH RGHSNPSSQG SHTDNKDVST ITVERSSDDG YNWRKYGQKL  240
VKGSEFPRSY YKCTYPNCEV KKIFERSPEG QITEIVYKGS HDHPKPQPSR RFTPGALTSI  300
QEDRGEKEAC FNGQEDKFNT NAQTSNIEPS STPLSPRLAD DDGLEGTASQ LHSANDQMDE  360
DDPFAKRRKL DGGMDITPIV KPIREPRVVV QTVSEVDILD DGYRWRKYGQ KVVRGNPNPR  420
SYYKCTNAGC PVRKHVERAS HDPKAVITTY EGKHNHDVPT ARTNSHEMAG SLPVTGGTRV  480
RTEENDAVSL DLGVGIGYGM ENRSNGQLHT LPAEAVRSQV QVSNSSMMLV QPAAVAACYG  540
IVNGSMSRFG SIDNRVQGTG FENLPLQPST QCPQNYGRLL LGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-37228459877Probable WRKY transcription factor 4
2lex_A3e-37228459877Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB7111310.0AB711131.1 Nicotiana benthamiana NbWRKY10 mRNA for transcription factor, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009591627.10.0PREDICTED: probable WRKY transcription factor 20 isoform X1
TrEMBLA0A0P0UVU30.0A0A0P0UVU3_NICBE; Transcription factor
STRINGXP_009591627.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40252344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.11e-125WRKY family protein