PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Ctg13350408g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | NAC | ||||||||
Protein Properties | Length: 172aa MW: 19912.2 Da PI: 10.3116 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 49 | 2e-15 | 11 | 122 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 +G FhPtd el+ ++Lk+ ++g +++++ i+ ++iy + +L+ + ++r k+++ k+ r+ ++g+Wk Peinf101Ctg13350408g00001.1 11 MGEGFHPTDVELI-NFLKRFLKGAPISTKCPIQPAKIYGDQLPSLE----------FLITRRFKHKKLHKNFIRTCTNGTWK 81 5788*********.9**********999655888888875433343..........5555555656667788999999**** PP NAM 85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 + + +++++ kg++vg k+++v+ + ++p+ + +W+m+ey Peinf101Ctg13350408g00001.1 82 GQTSGEPIKR-KGSVVGFKRSFVYLNTQEPTH-HKTWLMKEYF 122 *********9.999***********9888885.566******6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 16.014 | 9 | 147 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.35E-20 | 9 | 146 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-11 | 13 | 121 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence Send to blast |
MSSIVPRSHI MGEGFHPTDV ELINFLKRFL KGAPISTKCP IQPAKIYGDQ LPSLEFLITR 60 RFKHKKLHKN FIRTCTNGTW KGQTSGEPIK RKGSVVGFKR SFVYLNTQEP THHKTWLMKE 120 YFVVDEFFRE NNIAKQDDFV ICRIKKNTKK KSVKDVAVTT VLVDEDVNDI ID |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019241184.1 | 3e-48 | PREDICTED: NAC domain-containing protein 78-like | ||||
TrEMBL | A0A1J6KCJ0 | 7e-47 | A0A1J6KCJ0_NICAT; Nac domain-containing protein 78 | ||||
STRING | XP_009789986.1 | 1e-46 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA814 | 13 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33480.1 | 4e-13 | NAC domain containing protein 41 |