PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01190g00006.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 323aa    MW: 36826.7 Da    PI: 4.7917
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01190g00006.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.6e-11170213654
                               HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                                ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  Peaxi162Scf01190g00006.1 170 LMAERRRRKRLNERLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 213
                               589*********************66......****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.529164213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-14167222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-12170219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-9170213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.1E-15171227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MELTQQDFLE ELLAPRIESW NTFTSGVKEF FPNGWNYESP LFYQQNPEFI PSNSSFLSLL  60
SPSQSNFPCP FNPQEFYPFL DSFTTPAEVD STCNIQEEYH NRAIVEEGEI GLISTNFYGH  120
GQQEDSSYFN NNVKIEETTS TISCFPNNVG EKKSSSKVNK KIEGQPSKNL MAERRRRKRL  180
NERLSMLRSI VPKISKMDRT SILGDTIDYM KELLDKIHKL REDGMEDKIK DIKFLGNSKE  240
LKPNEALVRN PPKFDVERSN EETKIEICCA TKPGLLLSTI NTIEALGLDV QQCVVSCFSD  300
FSIKASCSEV FLLSTCPWLI ATS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172179ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009596776.11e-171PREDICTED: transcription factor bHLH93-like
RefseqXP_016515694.11e-171PREDICTED: transcription factor bHLH93-like
TrEMBLA0A1S4DRD41e-169A0A1S4DRD4_TOBAC; transcription factor bHLH93-like
STRINGXP_009596776.11e-170(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7892497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10570.14e-55bHLH family protein