PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00983g00005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | GeBP | ||||||||
Protein Properties | Length: 206aa MW: 24116.8 Da PI: 10.6756 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 38.8 | 2.7e-12 | 34 | 109 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqk 87 ++r+++e+Dei lL++l++ +++ f + + +++++q+++K+ rLK++++k ++ + +++++hdqk Peaxi162Scf00983g00005.1 34 PHRIFTENDEIQLLKALLKSPTNNS---------FTS-----QNGNFTETQITKKVTRLKERYHKLARN-----KSRIKTPHDQK 99 68****************8744433.........333.....3457899***************99998.....7799******* PP DUF573 88 ifelskkiWg 97 i+e+ +kiWg Peaxi162Scf00983g00005.1 100 IYEIGRKIWG 109 *********8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 3.5E-12 | 35 | 109 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MTTPRKQPIP AMNHRRSSPR SPKNPTTTSK SPEPHRIFTE NDEIQLLKAL LKSPTNNSFT 60 SQNGNFTETQ ITKKVTRLKE RYHKLARNKS RIKTPHDQKI YEIGRKIWGR KASKEKEQEL 120 HEVSKKEDVK LEDFPFLVSE MNKVFTRSEY CNEGLKRLGK EKLKSMNEKW MQLRLEESKL 180 MVNMAKLNHE NLKLVVESLK GESSNV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009592165.1 | 4e-84 | PREDICTED: probable transcription factor At1g61730 | ||||
TrEMBL | A0A1J6L2S0 | 4e-79 | A0A1J6L2S0_NICAT; Uncharacterized protein | ||||
STRING | XP_009592165.1 | 1e-83 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13634 | 7 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 6e-08 | DNA-binding storekeeper protein-related transcriptional regulator |