PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00703g00234.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family FAR1
Protein Properties Length: 137aa    MW: 15910.6 Da    PI: 6.5101
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00703g00234.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.89.4e-10731184490
                      FAR1  44 ekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                               ++++ ++++r+r e r+gC a+++ k + +g wev ++  eHnH++ 
  Peaxi162Scf00703g00234.1  73 RNQELTRKERQRLEYRCGCLARIRFKIS-NGMWEVFEFCDEHNHPMI 118
                               4445678999****************99.***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031015.0E-865118IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MGDSPADNDG FDNEDHNVGQ RSPTVQNVSD INNEFTLKIG MKFSCEDESY EAYNSYAVAK  60
GFGVRKGAKT YNRNQELTRK ERQRLEYRCG CLARIRFKIS NGMWEVFEFC DEHNHPMIEE  120
NLRHFIQSGR KLTDSTK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019266793.14e-58PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1-like
TrEMBLA0A1S3ZUA76e-56A0A1S3ZUA7_TOBAC; Uncharacterized protein
STRINGXP_009771804.13e-55(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1726931
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.12e-11FAR1-related sequence 10