PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00664g00033.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Trihelix
Protein Properties Length: 697aa    MW: 77458.8 Da    PI: 6.8755
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00664g00033.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix881.1e-2767151187
                  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                               rW++qe+ aL+++r+em+  +r+++lk+plW+ev +km++ g++rs+k+Ckek+en+ k++k++k+g+ ++   + +t+++f++l
  Peaxi162Scf00664g00033.1  67 RWPRQETIALLKIRSEMDVVFRDSSLKGPLWDEVCRKMADLGYHRSAKKCKEKFENVYKYHKRTKDGRASK--ADGKTYRFFEHL 149
                               8********************************************************************96..66678******9 PP

                  trihelix  86 ea 87 
                               ea
  Peaxi162Scf00664g00033.1 150 EA 151
                               85 PP
2trihelix104.76.5e-33489574187
                  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                               rW+k ev+aLi +r++++ +++++  k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql
  Peaxi162Scf00664g00033.1 489 RWPKAEVQALIMLRTNLDVKYQENGPKGPLWEEISAGMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQL 572
                               8*********************************************************************8.99*********** PP

                  trihelix  86 ea 87 
                               +a
  Peaxi162Scf00664g00033.1 573 DA 574
                               85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.6260124IPR017877Myb-like domain
SMARTSM007170.007864126IPR001005SANT/Myb domain
PfamPF138371.1E-1766152No hitNo description
CDDcd122031.26E-2566131No hitNo description
PROSITE profilePS500907.48482546IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.603.7E-4483545IPR009057Homeodomain-like
SMARTSM007170.0023486548IPR001005SANT/Myb domain
CDDcd122031.89E-30488553No hitNo description
PfamPF138375.3E-23489575No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 697 aa     Download sequence    Send to blast
MLGVTGIISS TNTSGDGATG ENQESGGGGG AAASGGSSEV AAHNNIMSSS GGFNITEEGE  60
RNSGGNRWPR QETIALLKIR SEMDVVFRDS SLKGPLWDEV CRKMADLGYH RSAKKCKEKF  120
ENVYKYHKRT KDGRASKADG KTYRFFEHLE ALENNPSSHS LLLPPSNSSR TPPPPLEATP  180
INMAMPMQST NAAINVQQVP PSVQGTNVTV SSTPPNNPFA TSQNTTTSHH QNVIHHVPPL  240
SSAMVQPSPQ PANPIQNPQV NTRLPSHHNV SMSYSTSSST SSDEDIQRRH KKKRKWKDYF  300
ERLMKDVIDK QEELQRSFLE TLEKRERDRL VREEAWRVQE IARMNKEHDL LLQERSMAAA  360
KDAAVIAFLQ KVSEQQNIQI PNNINITPPP PSAQVHVRLP ENPQAAPITH SSQQQQQNQT  420
QQGTVTVSSA SPQPVQAPAA VSLPITIPAP IPAQLLSHPL PPPITVKNVE ASKSDNGGES  480
YTPGASPSRW PKAEVQALIM LRTNLDVKYQ ENGPKGPLWE EISAGMRKLG YNRNAKRCKE  540
KWENINKYFK KVKESNKKRP EDSKTCPYFH QLDALYREKA KNESSSSTSF NPSASGFALN  600
QAENTMAPIM ARPEQQWPLP PHHQQQQHHH NTRMDHDHDH DHDHGSTDNM DEDEEEDEEE  660
EEDEDNAYEI VTNKQQSSMT AANTITSTTT TTATTTV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1286293QRRHKKKR
2286294QRRHKKKRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00244DAPTransfer from AT1G76890Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009618661.10.0PREDICTED: trihelix transcription factor GTL1-like
TrEMBLA0A1S3XDN40.0A0A1S3XDN4_TOBAC; trihelix transcription factor GTL1-like
STRINGXP_009618661.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24022459
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.21e-75Trihelix family protein