PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00536g00111.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family B3
Protein Properties Length: 441aa    MW: 48816.1 Da    PI: 7.499
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00536g00111.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.56e-1939129199
                               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                               ffkv+   d + s  +++p kfa+  ++    + +  led+sg++W+v+l  +++sg   +++GW +F +++gLk gDf+vF+++
  Peaxi162Scf00536g00111.1  39 FFKVM--IDKSFSWVMYFPPKFARLVSHLA--NEETYLEDSSGQRWTVRL--CNRSGPLAIRQGWHKFSSEHGLKMGDFLVFHYI 117
                               78888..788888889*******8775443..3479**************..********************************* PP

                               SSSEE..EEEEE-S CS
                        B3  86 grsefelvvkvfrk 99 
                               + + f  vv++f +
  Peaxi162Scf00536g00111.1 118 QGQHF--VVQIFGR 129
                               97888..****987 PP
2B332.61.4e-103494261694
                               EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                        B3  16 lvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                               l lp +  +++  +kk +++ ++l+ +++r W v +  + +sg  vl +GW  F    gLk gD +vF+l++ se+ ++v
  Peaxi162Scf00536g00111.1 349 LELPQSWPNAMvTKKKLGGILIKLQGPDNRCWLVMY--QERSGCKVLVDGWALFTAVYGLKPGDECVFQLVDLSERLFKV 426
                               55666665555666778999****************..88888899***********************98766664455 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.45E-2334132IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.108.1E-2236132IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.45137130IPR003340B3 DNA binding domain
CDDcd100171.61E-2038127No hitNo description
SMARTSM010192.5E-1539130IPR003340B3 DNA binding domain
PfamPF023622.7E-1739129IPR003340B3 DNA binding domain
PROSITE profilePS508639.389334432IPR003340B3 DNA binding domain
SMARTSM010190.049337427IPR003340B3 DNA binding domain
CDDcd100174.28E-9343428No hitNo description
Gene3DG3DSA:2.40.330.101.6E-9346428IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.75E-11347426IPR015300DNA-binding pseudobarrel domain
PfamPF023623.4E-8348426IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    Send to blast
MVRARGTVHQ KEACKECTRT CLLIHGQREP DPSPMVSSFF KVMIDKSFSW VMYFPPKFAR  60
LVSHLANEET YLEDSSGQRW TVRLCNRSGP LAIRQGWHKF SSEHGLKMGD FLVFHYIQGQ  120
HFVVQIFGRS GCQKTSFYPD SRKKKKRVRT DCEATSQDEL LPETDINLRK KQNSTPSVTA  180
VPESEQAVHQ PVTSTLASNI DADSEKRQRV PQAEGTSDAL QGENGPPTNV STNTGSQRES  240
SSVDGVPVEM EIVTSKTFLH FDDIGTSQTE NISEPVNNVS LLDQKDDTGG KVNAGKAPKK  300
VEKDGHGSAM AVNGNNKVIK SGPADSGDAS YPEAASFSYL LRVDGRSFLE LPQSWPNAMV  360
TKKKLGGILI KLQGPDNRCW LVMYQERSGC KVLVDGWALF TAVYGLKPGD ECVFQLVDLS  420
ERLFKVGIEY KLDVTQATLG D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141146RKKKKR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019235968.10.0PREDICTED: B3 domain-containing protein Os01g0905400-like
TrEMBLA0A1J6K5470.0A0A1J6K547_NICAT; B3 domain-containing protein
STRINGSolyc03g007140.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22102352
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.18e-13B3 family protein