PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00452g00720.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 311aa    MW: 35317.9 Da    PI: 7.7695
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00452g00720.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.44.2e-51261533128
                       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                               pGfrFhPtdeelv +yL++kve+k++++ e ik++diyk++PwdLpk+ + ++kewyfF+kr +ky+++ r+nr+t sg+Wkatg
  Peaxi162Scf00452g00720.1  26 PGFRFHPTDEELVGFYLRRKVEKKPISI-ELIKQIDIYKYDPWDLPKSSNVGDKEWYFFCKRGRKYRNSIRPNRVTCSGFWKATG 109
                               9***************************.89***************98899********************************** PP

                       NAM  88 kdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                d++++s+   ++e +glkk+Lv+y+g+a kg+kt+W+mhe+rl
  Peaxi162Scf00452g00720.1 110 IDRPIYSAvgqGRECIGLKKSLVYYRGSAGKGTKTEWMMHEFRL 153
                               *******98877777***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.28E-5424184IPR003441NAC domain
PROSITE profilePS5100553.17524184IPR003441NAC domain
PfamPF023651.3E-2526153IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005992Biological Processtrehalose biosynthetic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006561Biological Processproline biosynthetic process
GO:0009718Biological Processanthocyanin-containing compound biosynthetic process
GO:0010120Biological Processcamalexin biosynthetic process
GO:0042538Biological Processhyperosmotic salinity response
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MEIENVSSIV TSNYTEDDDQ EDVPLPGFRF HPTDEELVGF YLRRKVEKKP ISIELIKQID  60
IYKYDPWDLP KSSNVGDKEW YFFCKRGRKY RNSIRPNRVT CSGFWKATGI DRPIYSAVGQ  120
GRECIGLKKS LVYYRGSAGK GTKTEWMMHE FRLPAENDKS TKHIEAKSVA QEAEVWTLCR  180
ILKRNGSYRK CLPEWRSAAP AKRNPIDTSS KTCSDDSSDY IISFGAPVMR HNNYIAENKP  240
FSGHVHDISN NNQLLMAGQL TSVCQAPSSI AAASYSSFGQ STLAPDMNEL LKYGDLDELR  300
SVLELAIDPL F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-49201907171NO APICAL MERISTEM PROTEIN
1ut4_B7e-49201907171NO APICAL MERISTEM PROTEIN
1ut7_A7e-49201907171NO APICAL MERISTEM PROTEIN
1ut7_B7e-49201907171NO APICAL MERISTEM PROTEIN
3swm_A9e-492019010174NAC domain-containing protein 19
3swm_B9e-492019010174NAC domain-containing protein 19
3swm_C9e-492019010174NAC domain-containing protein 19
3swm_D9e-492019010174NAC domain-containing protein 19
3swp_A9e-492019010174NAC domain-containing protein 19
3swp_B9e-492019010174NAC domain-containing protein 19
3swp_C9e-492019010174NAC domain-containing protein 19
3swp_D9e-492019010174NAC domain-containing protein 19
4dul_A7e-49201907171NAC domain-containing protein 19
4dul_B7e-49201907171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00310DAPTransfer from AT2G43000Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009591286.10.0PREDICTED: transcription factor JUNGBRUNNEN 1-like
SwissprotQ9SK551e-89NAC42_ARATH; Transcription factor JUNGBRUNNEN 1
TrEMBLA0A1S4CIB00.0A0A1S4CIB0_TOBAC; transcription factor JUNGBRUNNEN 1-like
STRINGXP_009591286.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16972469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.17e-88NAC domain containing protein 42
Publications ? help Back to Top
  1. Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
    JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins.
    Plant Signal Behav, 2016. 11(6): p. e1181245
    [PMID:27159137]
  2. Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
    Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling.
    Nat Plants, 2016. 2: p. 16013
    [PMID:27249348]
  3. Shahnejat-Bushehri S, et al.
    Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato.
    Front Plant Sci, 2017. 8: p. 214
    [PMID:28326087]
  4. Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
    Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways.
    Plant J., 2017. 92(6): p. 1106-1120
    [PMID:29032592]
  5. Ebrahimian-Motlagh S, et al.
    JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
    Front Plant Sci, 2017. 8: p. 2118
    [PMID:29326734]