PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00404g00019.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family GeBP
Protein Properties Length: 324aa    MW: 35584.1 Da    PI: 4.9022
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00404g00019.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573102.73e-3285183192
                    DUF573   1 klfqrlwseeDeivlLqGlidfkaktgk.......spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkep 78 
                               klfqrlw+++Dei lLqG++d++ ++g+       + + d++afy+++k++ +++++k+qlveK+rrLKkK+++ ++k++sgke+
  Peaxi162Scf00404g00019.1  85 KLFQRLWTDDDEIELLQGFLDYTRQRGAngsssqhQHHYDTTAFYDQIKNKFQLDFNKNQLVEKLRRLKKKYRTVMSKMASGKEF 169
                               579************************9887754333449********************************************* PP

                    DUF573  79 sfskehdqkifels 92 
                               +f+++hdq +fe+s
  Peaxi162Scf00404g00019.1 170 VFKSAHDQITFEIS 183
                               ************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.8E-2987183IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MASIEDHQNQ PLYDDDVDVI DDDDDSTSSP SLAGEVTIAV TGGGGGDSSP PSLPPEPKRP  60
RLEDFTVPVA LPVQEKKPPF DDSRKLFQRL WTDDDEIELL QGFLDYTRQR GANGSSSQHQ  120
HHYDTTAFYD QIKNKFQLDF NKNQLVEKLR RLKKKYRTVM SKMASGKEFV FKSAHDQITF  180
EISPNTGAVK VEQKSGGSTT TNVVTPMVNS TTPMAAAGAP AAAAAPMLPS LIEETVRNCV  240
SPIFKELLNS VANMNGSRGL GLGGMAMSPI PLGFGGGGAM SMELMGDEKW RKQQMLELEV  300
YSKRLELVQD QIKAQLDELR KMGD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755137e-41HG975513.1 Solanum lycopersicum chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021669355.12e-90probable transcription factor At3g04930
SwissprotQ9CAV71e-45STKLJ_ARATH; Probable transcription factor At3g04930
TrEMBLA0A484L3L14e-92A0A484L3L1_9ASTE; Uncharacterized protein
STRINGAquca_003_00290.12e-81(Aquilegia coerulea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40522445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.27e-47DNA-binding storekeeper protein-related transcriptional regulator