PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00359g00815.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

NAC

Protein Properties

Length: 328aa MW: 37786.4 Da PI: 9.0133

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00359g00815.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.4	8.2e-51	34	163	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 pGfrFhPtdeelv++yL++kve+k++++ + ikevdiyk++PwdLp++ ++ kewyfF+ r +ky+++ r+nr+t sg+Wkat Peaxi162Scf00359g00815.1 34 LPGFRFHPTDEELVSFYLRRKVEKKRIKI-DLIKEVDIYKHDPWDLPMSRMGDIKEWYFFCMRGRKYKNSVRPNRVTGSGFWKAT 117 69*************************.99***********65556789************************** PP NAM 87 gkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 g dk+v+s ++ +glkk+Lv+y+g+a kg+ktdW+mhe+rl Peaxi162Scf00359g00815.1 118 GIDKPVYSVsqthDNDCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 163 ***9855544455*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.57E-52	32	196	IPR003441	NAC domain
PROSITE profile	PS51005	51.987	33	197	IPR003441	NAC domain
Pfam	PF02365	1.1E-25	35	163	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence Send to blast
MSEKRAEKAE AMEVESIAAA SKSKTDDKEE TIILPGFRFH PTDEELVSFY LRRKVEKKRI 60 KIDLIKEVDI YKHDPWDLPM SRMGDIKEWY FFCMRGRKYK NSVRPNRVTG SGFWKATGID 120 KPVYSVSQTH DNDCIGLKKS LVYYRGSAGK GTKTDWMMHE FRLPPTWKST SNQLMLNSKN 180 INTQEAEVWT LCRIFKRASN YKRFTPDNWK QPNIVKQTFG DASSKACSLQ SETSDDHSNS 240 INFKKHNINA ALAGTYHQAD QRDTLNYRIN SQLPVTNMPQ SSFTSSNSSF WNSTSAEEDQ 300 HLFSDGNWDE LKSVVDLAID PHSLFGFN

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	1e-49	22	203	4	174	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269\|PubMed:22345491}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269\|PubMed:22345491}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019233070.1	1e-161	PREDICTED: transcription factor JUNGBRUNNEN 1-like isoform X2
Swissprot	Q9SK55	1e-88	NAC42_ARATH; Transcription factor JUNGBRUNNEN 1
TrEMBL	A0A1J6KE18	1e-159	A0A1J6KE18_NICAT; Transcription factor jungbrunnen 1
STRING	XP_009760718.1	1e-158	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1697	24	69

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	1e-86	NAC domain containing protein 42

Publications ? help Back to Top
Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins. Plant Signal Behav, 2016. 11(6): p. e1181245 [PMID:27159137] Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling. Nat Plants, 2016. 2: p. 16013 [PMID:27249348] Shahnejat-Bushehri S, et al. Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato. Front Plant Sci, 2017. 8: p. 214 [PMID:28326087] Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways. Plant J., 2017. 92(6): p. 1106-1120 [PMID:29032592] Ebrahimian-Motlagh S, et al. JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13. Front Plant Sci, 2017. 8: p. 2118 [PMID:29326734]