PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00354g00112.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family C2H2
Protein Properties Length: 283aa    MW: 31406.6 Da    PI: 8.381
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00354g00112.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.0002221243223
                               EETTTTEEESSHHHHHHHHHH.T CS
                   zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                               +Cp C+ +Fs+   L++H ++ H
  Peaxi162Scf00354g00112.1 221 QCPQCTLRFSSVTALVNHVQKvH 243
                               7******************9988 PP
2zf-C2H2163.4e-05255277223
                               EETTTTEEESSHHHHHHHHHH.T CS
                   zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                               +Cp C+k F+++ +L+ H  + H
  Peaxi162Scf00354g00112.1 255 VCPRCSKGFPDPVSLVEHVEReH 277
                               7*****************99888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1183101.01E-12752No hitNo description
PROSITE profilePS510397.5031059IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.101.0E-101153IPR000058Zinc finger, AN1-type
PfamPF014283.9E-131351IPR000058Zinc finger, AN1-type
SMARTSM001541.2E-41352IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.103.2E-990145IPR000058Zinc finger, AN1-type
SuperFamilySSF1183104.06E-893147No hitNo description
PROSITE profilePS510398.00598156IPR000058Zinc finger, AN1-type
PfamPF014281.5E-6101139IPR000058Zinc finger, AN1-type
SMARTSM001540.013101142IPR000058Zinc finger, AN1-type
SMARTSM003550.014220243IPR015880Zinc finger, C2H2-like
SuperFamilySSF576677.08E-5221273No hitNo description
PfamPF138943.2E-4221243No hitNo description
PROSITE patternPS000280222243IPR007087Zinc finger, C2H2
SMARTSM003556.8254277IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.954254282IPR007087Zinc finger, C2H2
PROSITE patternPS000280256277IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MGTPAFPNLG KHCSKDDCRQ IDFLPFTCDS CHQVFCLEHR SYNRHQCPTA NKNDVTVVVC  60
PLCAKGVRLF PDEDPNITWE SHVNTGCDPS NYEKATKKRK CPVPRCRESL TFSNTIKCRE  120
CTVDHCLKHR FGPDHNCPGC KKPESVFQFM NFRAGSRKEE PNKAPATSSS SWATTLFKAA  180
ETGMAKLSGE FSQTLQMGKD GRGQSSSASY RSGTANGQVE QCPQCTLRFS SVTALVNHVQ  240
KVHEKNGVMN LTIDVCPRCS KGFPDPVSLV EHVEREHKGT SKA
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in environmental stress response. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00306DAPTransfer from AT2G41835Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754491e-133HG975449.1 Solanum pennellii chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009765392.11e-179PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like
RefseqXP_016478515.11e-179PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like
SwissprotQ8VZ421e-120SAP11_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
TrEMBLA0A1S4APP01e-177A0A1S4APP0_TOBAC; zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like
TrEMBLA0A1U7VBI41e-177A0A1U7VBI4_NICSY; zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like
STRINGXP_009765392.11e-178(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53112237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-121C2H2 family protein