PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00270g00317.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family GATA
Protein Properties Length: 707aa    MW: 77932.8 Da    PI: 10.2972
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00270g00317.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.22.3e-18217250134
                      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                               C++C  tkTp+WR+gp g+ktLCnaCG++yr+ +
  Peaxi162Scf00270g00317.1 217 CTHCEITKTPQWREGPLGPKTLCNACGVRYRSGR 250
                               *******************************987 PP
2GATA28.32.4e-09372392122
                      GATA   1 CsnCgttkTplWRrgpdgnktL 22 
                               C++C +tkTp+WR+gp g++ L
  Peaxi162Scf00270g00317.1 372 CTHCEVTKTPQWREGPLGPR-L 392
                               ******************98.5 PP
3GATA28.81.7e-09444465122
                      GATA   1 CsnCgttkTplWRrgpdgnktL 22 
                               C+ Cg+tkTp+WR+gp g+ktL
  Peaxi162Scf00270g00317.1 444 CTRCGVTKTPQWREGPLGPKTL 465
                               ********************98 PP
4GATA26.58.9e-09518539122
                      GATA   1 CsnCgttkTplWRrgpdgnktL 22 
                               C++C +tkT++WR+gp g+ktL
  Peaxi162Scf00270g00317.1 518 CTHCEVTKTTQWREGPMGPKTL 539
                               ********************98 PP
5GATA53.63e-17592625134
                      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                               C++C +tkTp+WR gp g+ktLCnaCG++yr+ +
  Peaxi162Scf00270g00317.1 592 CRHCEATKTPQWRGGPWGPKTLCNACGVRYRSGR 625
                               *******************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577161.66E-14211273No hitNo description
SMARTSM004012.6E-16211261IPR000679Zinc finger, GATA-type
PROSITE profilePS5011411.213215247IPR000679Zinc finger, GATA-type
CDDcd002026.32E-14216263No hitNo description
Gene3DG3DSA:3.30.50.106.2E-14216248IPR013088Zinc finger, NHR/GATA-type
PfamPF003204.1E-16217250IPR000679Zinc finger, GATA-type
PROSITE patternPS003440217242IPR000679Zinc finger, GATA-type
SMARTSM004010.0021366407IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.106.7E-5371389IPR013088Zinc finger, NHR/GATA-type
PfamPF003206.0E-7372391IPR000679Zinc finger, GATA-type
SMARTSM004010.004438489IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.103.7E-5443465IPR013088Zinc finger, NHR/GATA-type
PfamPF003205.4E-7444465IPR000679Zinc finger, GATA-type
SMARTSM004016.1E-4512559IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.106.4E-5517539IPR013088Zinc finger, NHR/GATA-type
PfamPF003203.2E-6518539IPR000679Zinc finger, GATA-type
SMARTSM004015.4E-14586636IPR000679Zinc finger, GATA-type
PROSITE profilePS5011410.739590622IPR000679Zinc finger, GATA-type
CDDcd002024.98E-13591638No hitNo description
SuperFamilySSF577169.03E-14591649No hitNo description
Gene3DG3DSA:3.30.50.101.3E-12591623IPR013088Zinc finger, NHR/GATA-type
PfamPF003205.7E-15592625IPR000679Zinc finger, GATA-type
PROSITE patternPS003440592617IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 707 aa     Download sequence    Send to blast
MANSRKMTMV ESRGGIPTGP VVDEDFDDIL NFFDFPLETL EEDGLGVEWN ASESKFLGPI  60
PTDVLMDFPP VPHGNIGNGR VNAAPTFNRP NKLAEAQGTG IFQTQSPVSV LESNNSCPGG  120
KSISIKHDIA IPVRPRSKRP RSSAVNPWIL MEPISSTRLA SRKISDARKG KEKKRKELLG  180
AKEAMKNSVQ QINDTMPVAD VTKKLSFVQQ SSFVKRCTHC EITKTPQWRE GPLGPKTLCN  240
ACGVRYRSGR LFPEYRPAAS PTFVPSLHSN SHRKVIEMRK KAVDGSAAVE EPYKMIMGRK  300
REALPEPTTV EDTPMSPAPE KISAARKVPM LSGAKEAMKG SVQLINDKIS QIADVTEKKL  360
ASAQQSGCVK KCTHCEVTKT PQWREGPLGP RLSGEEKRKV SMLSGAKEAM KISVRQISDT  420
MPKITDFTEK KLACAQQSGS VKKCTRCGVT KTPQWREGPL GPKTLSGKEE TTKVSMLSGA  480
KEAMKNAVQQ INDKMPQIAD ITKKKLTSAR QSSFVKRCTH CEVTKTTQWR EGPMGPKTLS  540
GKEKKWNVSM LSGAKEAVKN SAQQINDTMP QIADVTKKKL TSVPESSFVQ KCRHCEATKT  600
PQWRGGPWGP KTLCNACGVR YRSGRLFPEY RPTASPTFVP SLHSNSHRKV IEMIKEAVDG  660
SAAVEERHRV IIGRKREAFA EPTIVEGTPM SPAPEFVPMS SYLFDVY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1167176RKGKEKKRKE
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00130DAPTransfer from AT1G08010Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006340186.11e-163PREDICTED: GATA transcription factor 11-like
TrEMBLM1AE861e-162M1AE86_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000208761e-163(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31342149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.22e-37GATA family protein