PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00176g01638.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 924aa    MW: 103723 Da    PI: 4.641
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00176g01638.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.61.7e-51211481128
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                               l+pGfrFhPtdeelv +yL++k+ gk++++ ++++e+d+yk+ePw+L   +++k+++ ewyfFs+ dkky +g+r nrat +gyW
  Peaxi162Scf00176g01638.1  21 LAPGFRFHPTDEELVRYYLRRKIIGKPFRF-QAVTEIDVYKSEPWELAgySSLKNRDLEWYFFSPVDKKYGNGSRLNRATGQGYW 104
                               579*************************99.88**************85336777777*************************** PP

                       NAM  84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               katgkd++v + k++++g+kktLvf++grap+g++t+Wvmheyrl
  Peaxi162Scf00176g01638.1 105 KATGKDRHVRH-KSQDIGMKKTLVFHSGRAPDGKRTNWVMHEYRL 148
                               ***********.999****************************98 PP
2NAM165.91.4e-513955221128
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                               l+pGfrFhPtdeelv +yL++kv gk+l++ ++i+e+diykvePwdLp  +++k+++ ewyfF+  dkk+ +g ++nrat++gyW
  Peaxi162Scf00176g01638.1 395 LAPGFRFHPTDEELVRYYLRRKVIGKPLRF-DAISEIDIYKVEPWDLPglSRLKTRDLEWYFFTMLDKKHGNGAKTNRATDRGYW 478
                               579*************************99.99***************6448888999*************************** PP

                       NAM  84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               k+tgkd++v++ k+++vg+kktLv+++grapkg++++Wvmhey+l
  Peaxi162Scf00176g01638.1 479 KTTGKDRAVHH-KSKVVGMKKTLVYHSGRAPKGQRSNWVMHEYKL 522
                               ***********.999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-6216171IPR003441NAC domain
PROSITE profilePS5100558.1821171IPR003441NAC domain
PfamPF023651.2E-2723148IPR003441NAC domain
SuperFamilySSF1019413.4E-60391545IPR003441NAC domain
PROSITE profilePS5100557.694395545IPR003441NAC domain
PfamPF023653.4E-27397522IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 924 aa     Download sequence    Send to blast
MEQEGSLVVT VATPAPAPTS LAPGFRFHPT DEELVRYYLR RKIIGKPFRF QAVTEIDVYK  60
SEPWELAGYS SLKNRDLEWY FFSPVDKKYG NGSRLNRATG QGYWKATGKD RHVRHKSQDI  120
GMKKTLVFHS GRAPDGKRTN WVMHEYRLTD EELVKAGIVQ DSFVLCRIFH KSGLGPPNSD  180
RYAPFVEEEW DDDAAVVPGE EAEDDVANGD EARVEGNDLD QDARQKTPRH CENLIEPQNL  240
PLVCKRESSE DHEFLSLSQS KRPKHDDPSS SRANGSEDST ISSHDPPTMM MMTNSSPTLL  300
GFPLLESIEP KESQPSNPPA FDSSNLEKSV PPGYLKFISN LEHEILNVSM EKETLKLEVM  360
RAQAMMNVLQ SRIDLLNREN EDMRRLLIME SRKSLAPGFR FHPTDEELVR YYLRRKVIGK  420
PLRFDAISEI DIYKVEPWDL PGLSRLKTRD LEWYFFTMLD KKHGNGAKTN RATDRGYWKT  480
TGKDRAVHHK SKVVGMKKTL VYHSGRAPKG QRSNWVMHEY KLIDEELDKA GISQDAFVLC  540
RVFQKSGAGP KNGEKYGAPF VEEEWDDDEL EFVPKGGQSK EEIVPKEEAA EEVEFGDDIY  600
LDGHDLEQIL GTDTPVDGAP LSLNRYYEEN ASNSEETGNS FEDVQNWIQQ PEEQEEQEPF  660
DPAIQQNANA NPVKHEFMSE PSKSVNSEDV DYLLNEPIVT ATDNQQFDDG AFLEASDLSR  720
PITVDTSGFD MLEEYLTYFD ATDDFQNMGF DPPMMIGGDD HVSDLASLNE KNTTEVADQP  780
IALCEKLPDD VASSSKMEPS KFGSDYQYPF MKKGSCMLSS IPAPPAFASE FPSKDLRLNS  840
SSGASSSIHV TAGFIQIRNM TVSGNGSDGL VGKHGNFNIV LSFGLPQHGD SSASMESVVS  900
ILPGKTISTA SCYMQNACVS LTNI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-472055119174NAC domain-containing protein 19
3swm_B2e-472055119174NAC domain-containing protein 19
3swm_C2e-472055119174NAC domain-containing protein 19
3swm_D2e-472055119174NAC domain-containing protein 19
3swp_A2e-472055119174NAC domain-containing protein 19
3swp_B2e-472055119174NAC domain-containing protein 19
3swp_C2e-472055119174NAC domain-containing protein 19
3swp_D2e-472055119174NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (By similarity). Transcripition activator associated with the induction of genes related to flavonoid biosynthesis and required for the accumulation of anthocyanins in response to high light stress (PubMed:19887540). Plays a role in the regulation of 20S and 26S proteasomes in response to high light stress (PubMed:21889048). {ECO:0000250|UniProtKB:Q949N0, ECO:0000269|PubMed:19887540, ECO:0000269|PubMed:21889048}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By exposure to high light (PubMed:19887540). Induced by heat and methyl methanesulfonate (MMS) treatment (PubMed:17158162). {ECO:0000269|PubMed:17158162, ECO:0000269|PubMed:19887540}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF5098710.0AF509871.1 Petunia x hybrida nam-like protein 8 (NH8) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019232054.10.0PREDICTED: NAC domain-containing protein 78-like
SwissprotQ84K001e-129NAC78_ARATH; NAC domain-containing protein 78
TrEMBLA0A3Q7JIC20.0A0A3Q7JIC2_SOLLC; Uncharacterized protein
STRINGXP_009625486.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31412450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.11e-113NAC domain containing protein 53
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Liang M, et al.
    Subcellular Distribution of NTL Transcription Factors in Arabidopsis thaliana.
    Traffic, 2015. 16(10): p. 1062-74
    [PMID:26201836]
  4. Xiao D, et al.
    SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1275-91
    [PMID:26304848]
  5. Gladman NP,Marshall RS,Lee KH,Vierstra RD
    The Proteasome Stress Regulon Is Controlled by a Pair of NAC Transcription Factors in Arabidopsis.
    Plant Cell, 2016. 28(6): p. 1279-96
    [PMID:27194708]
  6. Tang Y,Zhao CY,Tan ST,Xue HW
    Arabidopsis Type II Phosphatidylinositol 4-Kinase PI4Kγ5 Regulates Auxin Biosynthesis and Leaf Margin Development through Interacting with Membrane-Bound Transcription Factor ANAC078.
    PLoS Genet., 2016. 12(8): p. e1006252
    [PMID:27529511]