PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00071g00158.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

FAR1

Protein Properties

Length: 621aa MW: 72562.8 Da PI: 8.3417

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00071g00158.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62	1.7e-19	92	185	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkl 81 +fY ++Ak+vGFsvr+++ s ++ i+k+++vC + g++ ++k +++++r ++++r++C+ak+ + ke +w v + Peaxi162Scf00071g00158.1 92 NFYVSFAKRVGFSVRRDRYLGSeEHPMGIYKKDYVCHRAGRSYSQKIVEKERQRDQKSSRCNCTAKMSIAKELidgIPRWIVVYF 176 6*************999888455667**********999999899999************998845569** PP FAR1 82 eleHnHela 90 ++ HnHel Peaxi162Scf00071g00158.1 177 DNVHNHELL 185 *****96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.5E-16	92	185	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 621 aa Download sequence Send to blast
MPLPLSLRSL KVAGREEEKK EHRIRLPQRV LMGSWQRRSN CACGDNGCYI NGDVAVGSTE 60 IFNQDLGQEN IDISNRDLHK GKVFSTHDEA YNFYVSFAKR VGFSVRRDRY LGSEEHPMGI 120 YKKDYVCHRA GRSYSQKIVE KERQRDQKSS RCNCTAKMSI AKELIDGIPR WIVVYFDNVH 180 NHELLNEKEV RFLPAYRNID IIDKKRITLL AKAGCSMSLI RRVLDLEKGV DVGKLSFTEK 240 DIRNFLQLES STNIEYDALE LLKVCKSLKG KDVDFHYDFT VDSCQLLEHI IWAFGDSTHA 300 YEIFGYVVVF YTTYRFNRYE MPLGFWIGVN NRGNSIFFGC SFIRLMKGKH LQTKLTDQDL 360 GLTEAITNEL PHTKHAFCIW HITSKYMQFK SKFHKINELG SIKEFEHQWD ELIAKFDLEL 420 DRNIKFQYAN FLTPFAFTLL QDEMILSVEY GLVSNGDDSY IVRHYSKTDG GRFVQCFPKS 480 IIFRVLSSHN YFMLPDKYFF PRWRQENSLV LKFSHIINYP NDANELHSFQ SIIRDLILES 540 MKSKSRLIYA KKELERLLQV VQCLLENELI IEEHGNITVS QIAEHESSDD DYQVENPQQS 600 QTKGRKRGKS FSLYKKSDAT R

Sequence ? help Back to Top

Protein Sequence Length: 621 aa Download sequence Send to blast

MPLPLSLRSL KVAGREEEKK EHRIRLPQRV LMGSWQRRSN CACGDNGCYI NGDVAVGSTE  60
IFNQDLGQEN IDISNRDLHK GKVFSTHDEA YNFYVSFAKR VGFSVRRDRY LGSEEHPMGI  120
YKKDYVCHRA GRSYSQKIVE KERQRDQKSS RCNCTAKMSI AKELIDGIPR WIVVYFDNVH  180
NHELLNEKEV RFLPAYRNID IIDKKRITLL AKAGCSMSLI RRVLDLEKGV DVGKLSFTEK  240
DIRNFLQLES STNIEYDALE LLKVCKSLKG KDVDFHYDFT VDSCQLLEHI IWAFGDSTHA  300
YEIFGYVVVF YTTYRFNRYE MPLGFWIGVN NRGNSIFFGC SFIRLMKGKH LQTKLTDQDL  360
GLTEAITNEL PHTKHAFCIW HITSKYMQFK SKFHKINELG SIKEFEHQWD ELIAKFDLEL  420
DRNIKFQYAN FLTPFAFTLL QDEMILSVEY GLVSNGDDSY IVRHYSKTDG GRFVQCFPKS  480
IIFRVLSSHN YFMLPDKYFF PRWRQENSLV LKFSHIINYP NDANELHSFQ SIIRDLILES  540
MKSKSRLIYA KKELERLLQV VQCLLENELI IEEHGNITVS QIAEHESSDD DYQVENPQQS  600
QTKGRKRGKS FSLYKKSDAT R

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016499085.1	0.0	PREDICTED: protein FAR1-RELATED SEQUENCE 11-like
TrEMBL	A0A1S4CD64	0.0	A0A1S4CD64_TOBAC; protein FAR1-RELATED SEQUENCE 11-like
STRING	XP_009596355.1	1e-165	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7183	7	22

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	1e-104	FAR1-related sequence 10