PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00062g01420.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bHLH

Protein Properties

Length: 463aa MW: 50900.7 Da PI: 5.1725

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00062g01420.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.3	8.5e-11	400	445	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L A +YIk+L+ Peaxi162Scf00062g01420.1 400 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDFAADYIKELE 445 689*******************7....688*************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	14.519	394	444	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	5.76E-15	397	455	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.58E-11	398	449	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.0E-13	399	455	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.1E-7	400	445	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	3.2E-12	400	450	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence Send to blast
MDNRSHQQQQ MTSGLTRYRS APSSYFASLL NSNPASVAGA GGGNCGYARD DFDQLLNSRA 60 SNTENIKQVF DRFVANIDPQ DSNPNGLIGD TQQIQKKKQN PISNMNVTSE VVAPTKQEHE 120 AQQQQQMNYQ RQAQQSHNSQ FIAPVKQEIT QEALQQQQNC DYSLASQMNY QTQAQQNDNS 180 AYLDSAIDNF NRFLGSVDSK MDGGVGTGCG NSNLTRYNSS PAGFFAQVNI ENEYGAMRGI 240 GSYGAGNNAA AEASFSTSNR FSNQIGLSSG QPPPSGLLAP ISDFGAKGME DSRPGDESFG 300 KGHKNDESYI AGFPMPSWDE SQFLTDDFLQ IPENHETGQF SNVNASDNQS SEGRARPPAL 360 LSHLSLPQTT AELSAMEKLL QDSVPCKVRA KRGFATHPRS IAERVRRTRI SERMRKLQEL 420 VPNMDKQTNT ADMLDFAADY IKELETQVKT LSDTRSKCTC SNE

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence Send to blast

MDNRSHQQQQ MTSGLTRYRS APSSYFASLL NSNPASVAGA GGGNCGYARD DFDQLLNSRA  60
SNTENIKQVF DRFVANIDPQ DSNPNGLIGD TQQIQKKKQN PISNMNVTSE VVAPTKQEHE  120
AQQQQQMNYQ RQAQQSHNSQ FIAPVKQEIT QEALQQQQNC DYSLASQMNY QTQAQQNDNS  180
AYLDSAIDNF NRFLGSVDSK MDGGVGTGCG NSNLTRYNSS PAGFFAQVNI ENEYGAMRGI  240
GSYGAGNNAA AEASFSTSNR FSNQIGLSSG QPPPSGLLAP ISDFGAKGME DSRPGDESFG  300
KGHKNDESYI AGFPMPSWDE SQFLTDDFLQ IPENHETGQF SNVNASDNQS SEGRARPPAL  360
LSHLSLPQTT AELSAMEKLL QDSVPCKVRA KRGFATHPRS IAERVRRTRI SERMRKLQEL  420
VPNMDKQTNT ADMLDFAADY IKELETQVKT LSDTRSKCTC SNE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006365809.1	0.0	PREDICTED: transcription factor bHLH128-like
Refseq	XP_006365810.1	0.0	PREDICTED: transcription factor bHLH128-like
TrEMBL	M1C7B5	0.0	M1C7B5_SOLTU; Uncharacterized protein
STRING	Solyc12g100140.1.1	0.0	(Solanum lycopersicum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4605	22	39

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51140.1	3e-55	bHLH family protein