PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00017g00243.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | NAC | ||||||||
Protein Properties | Length: 267aa MW: 30366.7 Da PI: 8.1921 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 62.3 | 1.6e-19 | 2 | 127 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 G +F Ptd el+ +yLk+ + gk+l+ + i+ +iy Pw + +++e+ wy ++ +k +++ k+ r++ +g W+ + Peaxi162Scf00017g00243.1 2 GEQFLPTDGELI-KYLKRFLMGKPLPNHCPIQLGEIYCDkPPWVIF--GSSQENVWYVITPLKKVKKQHKKFCRKVGNGSWSGQT 83 789*********.9**********9996669999887661667775..346789******************************* PP NAM 88 kdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128 + ++++++g++vg +k+Lv+ + ++++ + +W+m ey++ Peaxi162Scf00017g00243.1 84 SGDPIKNREGTVVGFRKSLVYEsssTSKEQRKNGVNWLMREYSV 127 *********************954434555556789******86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 22.405 | 1 | 150 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.9E-13 | 2 | 127 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.09E-22 | 2 | 149 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence Send to blast |
MGEQFLPTDG ELIKYLKRFL MGKPLPNHCP IQLGEIYCDK PPWVIFGSSQ ENVWYVITPL 60 KKVKKQHKKF CRKVGNGSWS GQTSGDPIKN REGTVVGFRK SLVYESSSTS KEQRKNGVNW 120 LMREYSVGDD YFKRKGIPKQ DVVLCQIKKH VKEKTVKNAV ALEEKDVEGV IQAMLHGPKY 180 CSTQANNNEL FEAVNGMKDL VPEVYDHQTN SNNIDFWKEM INGIEGEGIN VPQDLVEEVR 240 GWIVPEHSET VELKTQQTGA QGYVLGY |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019255290.1 | 2e-69 | PREDICTED: NAC domain-containing protein 78-like | ||||
TrEMBL | A0A1J6IG49 | 4e-68 | A0A1J6IG49_NICAT; Nac domain-containing protein 78 | ||||
STRING | XP_009787362.1 | 3e-67 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA814 | 13 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 8e-16 | NAC domain containing protein 2 |