PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00017g00243.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 267aa    MW: 30366.7 Da    PI: 8.1921
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00017g00243.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.31.6e-1921274128
                       NAM   4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                               G +F Ptd el+ +yLk+ + gk+l+ +  i+  +iy    Pw +    +++e+ wy  ++ +k +++ k+  r++ +g W+ + 
  Peaxi162Scf00017g00243.1   2 GEQFLPTDGELI-KYLKRFLMGKPLPNHCPIQLGEIYCDkPPWVIF--GSSQENVWYVITPLKKVKKQHKKFCRKVGNGSWSGQT 83 
                               789*********.9**********9996669999887661667775..346789******************************* PP

                       NAM  88 kdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                               +  ++++++g++vg +k+Lv+    + ++++ +  +W+m ey++
  Peaxi162Scf00017g00243.1  84 SGDPIKNREGTVVGFRKSLVYEsssTSKEQRKNGVNWLMREYSV 127
                               *********************954434555556789******86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.4051150IPR003441NAC domain
PfamPF023659.9E-132127IPR003441NAC domain
SuperFamilySSF1019412.09E-222149IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MGEQFLPTDG ELIKYLKRFL MGKPLPNHCP IQLGEIYCDK PPWVIFGSSQ ENVWYVITPL  60
KKVKKQHKKF CRKVGNGSWS GQTSGDPIKN REGTVVGFRK SLVYESSSTS KEQRKNGVNW  120
LMREYSVGDD YFKRKGIPKQ DVVLCQIKKH VKEKTVKNAV ALEEKDVEGV IQAMLHGPKY  180
CSTQANNNEL FEAVNGMKDL VPEVYDHQTN SNNIDFWKEM INGIEGEGIN VPQDLVEEVR  240
GWIVPEHSET VELKTQQTGA QGYVLGY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019255290.12e-69PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A1J6IG494e-68A0A1J6IG49_NICAT; Nac domain-containing protein 78
STRINGXP_009787362.13e-67(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.18e-16NAC domain containing protein 2