PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00007g01411.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 350aa    MW: 40526.8 Da    PI: 5.1226
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00007g01411.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH171.1e-05206248754
                               HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                r r R +++ ++   L +llP++     kK++ a++Le+A +Y+k L
  Peaxi162Scf00007g01411.1 206 TRTRTRSQKLSEKTRSLEKLLPWD-----KKMDTATMLEEAYKYVKFL 248
                               57799******************9.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.58E-5195253No hitNo description
PROSITE profilePS5088811.426199248IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-8202258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0051205254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-7207257IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MDIKPVFEPA FNAGEMFQPL MDADEAFING LYDGLSYQSI LNMNLNHSYF HPPLLSQLHQ  60
TPITFDFSST TTADFQNKLK FPKVEPLLYD DFSPYYYDAG LTTYRYGGEV MIPDLSLSPP  120
FQTQKFPKLE PVTDDFYYYS YPYNNDIILN EPYNYSNSFS TLPDLRSVEQ YPYNYTDFFN  180
GESSLYSTET LVKPKRQRKP YEKSTTRTRT RSQKLSEKTR SLEKLLPWDK KMDTATMLEE  240
AYKYVKFLKA QVSVLQNMPM LVEGGGSSYE DKKGKESCTS SSVCGTLLER LNRQQLLQVV  300
LNSAKAQTYL YSKGCCVYSA EQLVEIQRND KRDALNQQML FFTALEIKDN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192197KPKRQR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006360553.13e-90PREDICTED: transcription factor bHLH69
TrEMBLM1CH108e-89M1CH10_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000672871e-89(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112501821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.17e-16bHLH family protein