PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr034838.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | bHLH | ||||||||
Protein Properties | Length: 352aa MW: 38535.7 Da PI: 7.326 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.4 | 1.7e-10 | 76 | 125 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r++ + rE+ RRdr+N+ f+eL l ++ +K++Ka+iL+ +++ +k+L Pbr034838.2 76 RKVQKADREKVRRDRLNEHFFELGNTLDPD----RPKNDKATILTDTIQMLKDL 125 5677889********************997....79****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.294 | 75 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.67E-8 | 76 | 129 | No hit | No description |
Pfam | PF00010 | 3.4E-8 | 76 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.2E-12 | 76 | 147 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.57E-12 | 76 | 141 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.1E-7 | 81 | 131 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence Send to blast |
MDPWKSDDFS AASAPPSTHP LPSNRPHNSN SDSRLSLSLA PSPPSTHPLP SNRPHNSNSD 60 SRQRLDAETK DPIVARKVQK ADREKVRRDR LNEHFFELGN TLDPDRPKND KATILTDTIQ 120 MLKDLTADVN KLKAECAALT DESRELTQEK NELREEKASL KSDIENLNVQ YQQRLRVMLP 180 WAGMDPSVVM APPYPYPMPV AVPPGPIPMH PSLQPYPYFH AQNPAAMPNP CSTFVPYPVP 240 ANPPVEHPSL QCASVSHSSS KQDSRSRSSD HQRGSNAERC DDSNDVATDL ELKMPGSSAP 300 QDSSSGVKKA KQSQRKDRGI TDGSSSSRSS SSQVVQESSS NSVGDVPKPN K* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr034838.2 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009363493.1 | 0.0 | PREDICTED: transcription factor bHLH121-like | ||||
Swissprot | Q9LT23 | 5e-86 | BH121_ARATH; Transcription factor bHLH121 | ||||
TrEMBL | A0A498KGZ8 | 0.0 | A0A498KGZ8_MALDO; Uncharacterized protein | ||||
STRING | XP_009363493.1 | 0.0 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2282 | 33 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.1 | 2e-72 | bHLH family protein |
Publications ? help Back to Top | |||
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