PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr033071.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 234aa    MW: 26502.9 Da    PI: 9.2651
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr033071.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.84.1e-11108149351
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                   +GV++  k+ +W A I++      +k+++lg+ g+ eeAa ++++a+ 
  Pbr033071.1 108 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAAHLYDRAAF 149
                  79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.9E-5107150IPR001471AP2/ERF domain
SMARTSM003803.0E-4107164IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-8108152IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.4E-6110154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MVSLRRRRLL GLGLCCEIPP VLDPLPRVVN SGTTPQNFSR TNPVSVHPMP ANDANQPDGN  60
TIVKAEFRSS TASGSSLSKE QHDVAGPTIK RRKRHRRKHA QNQEPCLMRG VYFKNMKWQA  120
AIKVDKKQIH LGTVGSQEEA AHLYDRAAFM CGREPNFDLS EEEKKELRKF KWDEFLAMTR  180
HAITNKKHRR RSGAESEKRS VSPQLEDANW EDDKEEVNVL SASEDADQDM LDS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr033071.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009371988.11e-176PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A498JXZ51e-134A0A498JXZ5_MALDO; Uncharacterized protein
STRINGXP_009371988.11e-175(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.13e-47ERF family protein