PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr021929.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | G2-like | ||||||||
Protein Properties | Length: 221aa MW: 24865.9 Da PI: 7.7309 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 105.5 | 3e-33 | 28 | 82 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp+LH+rFv+ v++LGG++kAtPk++l++m++kgLtl+hvkSHLQkYRl Pbr021929.1 28 KPRLRWTPDLHDRFVDTVTKLGGPDKATPKSVLRVMGLKGLTLYHVKSHLQKYRL 82 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 7.8E-32 | 25 | 82 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 11.694 | 25 | 85 | IPR017930 | Myb domain |
TIGRFAMs | TIGR01557 | 6.6E-25 | 28 | 83 | IPR006447 | Myb domain, plants |
SuperFamily | SSF46689 | 1.63E-16 | 28 | 84 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 2.0E-8 | 30 | 81 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 2.6E-19 | 131 | 176 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
MERNIYVTSE GEGNCGYENG VMMTRDPKPR LRWTPDLHDR FVDTVTKLGG PDKATPKSVL 60 RVMGLKGLTL YHVKSHLQKY RLGQHARKHN SVEEQSRENN GDSYVHFSNL HSTSSGIKSS 120 GGGKTEQGTI PLSEALKCQI EEQNSLQEQL EVQKKLQMRI EAQEKYLQAI LEKAQKGLTL 180 DVNGSHNIEA TRAQLTDFNL ALSNFMENIA NKIEEETQQR * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-21 | 28 | 85 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-21 | 28 | 85 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 2e-21 | 28 | 85 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-21 | 28 | 85 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-21 | 28 | 85 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-21 | 28 | 85 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-21 | 28 | 85 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-21 | 28 | 85 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-21 | 28 | 85 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-21 | 28 | 85 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-21 | 28 | 85 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-21 | 28 | 85 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr021929.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009347087.1 | 1e-130 | PREDICTED: myb family transcription factor PHL11 | ||||
Swissprot | C0SVS4 | 5e-74 | PHLB_ARATH; Myb family transcription factor PHL11 | ||||
TrEMBL | A0A498HNU9 | 1e-127 | A0A498HNU9_MALDO; Uncharacterized protein | ||||
STRING | XP_009347087.1 | 1e-130 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5101 | 31 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45580.1 | 7e-63 | G2-like family protein |
Publications ? help Back to Top | |||
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