PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pavir.6KG079800.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bZIP | ||||||||
Protein Properties | Length: 376aa MW: 40504.1 Da PI: 9.6034 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.4 | 9.7e-11 | 83 | 118 | 3 | 38 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 ++k +rr+++NReAAr+sR+RKka+i++Le+ +L Pavir.6KG079800.2.p 83 RDKTQRRLAQNREAARKSRLRKKAYIQNLETSRMKL 118 79****************************855444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.1E-8 | 80 | 127 | No hit | No description |
SMART | SM00338 | 0.0071 | 81 | 134 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.8E-8 | 83 | 120 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.048 | 83 | 125 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.61E-6 | 85 | 123 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 88 | 103 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 7.6E-27 | 169 | 248 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence Send to blast |
MGIYGRQRHQ MAAVGAWGDP FRPDGDALAA PLAAVAPVTV AAAADVVETE SKLGTRLAQH 60 DVVAVEEAPP SSDSFGHDDA RPRDKTQRRL AQNREAARKS RLRKKAYIQN LETSRMKLAR 120 LEQELAMARR QQGAHAGGGG VLAPAVADPR VAAFEVEYAR WVEEQEKQAE ELRAALQPGG 180 ALAPAQELQL RLLVDAAVAH YGALFEARAR AARADAFFVL SGVWRAPAER FFLWIGGFRP 240 SELLKVLAPR LGPLPEPQAS AVRALQNTAR QLEDALSQGM AKLQQTLVDA LMTVDAPDGG 300 AGGYAARQMA SAVGKLDDLV SFVDQADHLR QLTLRNMSEI LTVPQAARGL LALADYSQRL 360 RALSSLWAAR PREPA* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pavir.6KG079800.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025820316.1 | 0.0 | transcription factor TGA2.3-like isoform X2 | ||||
Swissprot | A0A0P0WFC8 | 1e-106 | TGAL6_ORYSJ; Transcription factor TGAL6 | ||||
TrEMBL | A0A2S3I0M0 | 0.0 | A0A2S3I0M0_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A2T7D490 | 0.0 | A0A2T7D490_9POAL; Uncharacterized protein | ||||
STRING | Si013962m | 0.0 | (Setaria italica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77920.1 | 5e-86 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Pavir.6KG079800.2.p |