PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK26145.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | C2H2 | ||||||||
Protein Properties | Length: 353aa MW: 38648.1 Da PI: 7.6924 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.9 | 0.00033 | 237 | 259 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H PK26145.1 237 HECSICGAEFNSGQALGGHMRRH 259 78********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 7.69E-7 | 138 | 161 | No hit | No description |
PROSITE profile | PS50157 | 10.492 | 139 | 166 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.28 | 139 | 161 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF13912 | 6.7E-10 | 139 | 163 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 141 | 161 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 7.69E-7 | 232 | 259 | No hit | No description |
Pfam | PF13912 | 6.7E-13 | 236 | 260 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.011 | 237 | 259 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.577 | 237 | 259 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 239 | 259 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence Send to blast |
MESQEELIVH NKDHDHDLTM MKQNMTMMMI KGKRTKRPRA PSSNLFTHMA SSSSSTGASG 60 GGSGSGGGGG FSLASPTTSS TELTETIIKT TEEEEDMANC LILLAQGGLH NDRLSSPENE 120 FQAAEKMAAC GSTNTTSIYQ CKTCNRCFQS FQALGGHRAS HKKPKTTANN NMNIINADHQ 180 VKENNNKQTL SFQVGVMDDH DHHQQLIING NSTSTALSLQ ISNSNNVKMN SKVPKVHECS 240 ICGAEFNSGQ ALGGHMRRHR TTPFNNNAQT TSFTSSTTTT ASHDHDHEKL KNNNTTTTMA 300 MVMKKKPRHV LELDLNLPAP DEDHRRETKF PFNAAAKEQV IVFSASPLVD CHY |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF586 | 34 | 141 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03510.1 | 4e-39 | C2H2 family protein |