PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK21037.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family FAR1
Protein Properties Length: 173aa    MW: 20418.1 Da    PI: 7.2497
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK21037.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.96e-2267152188
       FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                +fYn+YA++vGF +rksk +k  ++g +++rt++Cs+eg+ +++k++    rr++aetr gC a++kv  +++gk++v ++  eH+H 
  PK21037.1  67 NFYNAYAYKVGFGIRKSKRYKD-KHGVMINRTLYCSCEGYCQNDKRD-AIVRRHHAETRFGCLARMKVDCRQTGKYHVVEIIPEHTHV 152
                6*****************9998.7788****************9999.9999***********************************5 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.3E-1867152IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MDDHNKTMEI EFQSRRKLEF ERGEEEINED KLVDNNIKSI EVIHFEISEK LIPNIGMEFE  60
TEDEAYNFYN AYAYKVGFGI RKSKRYKDKH GVMINRTLYC SCEGYCQNDK RDAIVRRHHA  120
ETRFGCLARM KVDCRQTGKY HVVEIIPEHT HVTSTVGFCA LNKTHSNIIR FTN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015897844.14e-47protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_024930861.13e-46protein FAR1-RELATED SEQUENCE 5-like
STRINGXP_008246048.14e-36(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30451449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-24FAR1 family protein