PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PGSC0003DMP400037067 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family | EIL | ||||||||
Protein Properties | Length: 529aa MW: 58409.2 Da PI: 5.6372 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 170.3 | 2.2e-52 | 37 | 156 | 2 | 124 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 el++rmwkd+++lkrlke++k ++ a++++ +++ ++qa rkkmsraQDgiLkYMlk mevcna+GfvYgiip+kgkpv+g+sd+ PGSC0003DMP400037067 37 ELERRMWKDRVKLKRLKEKQKLA---AQLAAEKQDNKQVTDQATRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPDKGKPVSGSSDN 122 9****************999963...3445899999***************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 91 LraWWkekvefdrngpaaiskyqaknlilsgess 124 +raWWkekv+fd+ng aai+k++a +++e++ PGSC0003DMP400037067 123 IRAWWKEKVKFDKNGLAAIAKEEATLQQAGSENG 156 **********************654433333333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 4.2E-52 | 37 | 155 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0042762 | Biological Process | regulation of sulfur metabolic process | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 529 aa Download sequence Send to blast |
MINADVFGNS SDIEIDDIKC DNIAEKDVSD EEIEPNELER RMWKDRVKLK RLKEKQKLAA 60 QLAAEKQDNK QVTDQATRKK MSRAQDGILK YMLKLMEVCN ARGFVYGIIP DKGKPVSGSS 120 DNIRAWWKEK VKFDKNGLAA IAKEEATLQQ AGSENGSSSI EEPAGSRGEK KKSLISSDSD 180 YDVDGTDDGI GSVSSRNERR NHFHPLNAIR QSHQSTEKGD GHHRRRKRAR SNLTEKQIQP 240 SLLHGDEHSN TLPDINSSEM LLAGRITSDS LQGNDKSEAT KPVENDTESQ SELRLQDSNL 300 SFVPSANVVS TEDTYIGAGP SLYPMSLNSA VVPYESEMHL ENQGSIVQHQ FQDAQFHGLQ 360 KISGMNDGPQ ISLSHYGPPN NGLQYGPHSS IVHTELQVSE FAHGSQFSNF SQPPVYHSYS 420 SAEFGSTHAE PQSHLACNEL QIRPRDSGVG LSLHGSGNSK VNHHDGKDVF GNNHDRHIDM 480 PFASPLTIGS SYATLGSPFD LGIDVQSHFD NSDYDLDFDK ELMSFFAS* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00233 | DAP | Transfer from AT1G73730 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PGSC0003DMP400037067 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975440 | 0.0 | HG975440.1 Solanum pennellii chromosome ch01, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015164694.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | M1BXC8 | 0.0 | M1BXC8_SOLTU; Uncharacterized protein | ||||
STRING | PGSC0003DMT400055102 | 0.0 | (Solanum tuberosum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 2e-54 | ETHYLENE-INSENSITIVE3-like 3 |
Link Out ? help Back to Top | |
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Phytozome | PGSC0003DMP400037067 |
Publications ? help Back to Top | |||
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