PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_18150 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | WRKY | ||||||||
Protein Properties | Length: 178aa MW: 20655.3 Da PI: 6.3896 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 62 | 1.1e-19 | 18 | 80 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS...STTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae...dpkvveitYegeHnhe 59 Dg++WrKYGqK + +s +prsYY+Ct++ gCp++k +++++e p ++ Y+ +H+++ PEQU_18150 18 DGHQWRKYGQKRILNSMYPRSYYKCTHHkdqGCPATKTIQQKEEkffKPPKYTVSYNMQHTCK 80 9**************************99999********998733346788999**9*9997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.7E-22 | 3 | 81 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 9.42E-20 | 9 | 81 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.4E-27 | 16 | 81 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 15.457 | 18 | 58 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.9E-23 | 18 | 80 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence Send to blast |
TRKKTQSWTI STSVPHFDGH QWRKYGQKRI LNSMYPRSYY KCTHHKDQGC PATKTIQQKE 60 EKFFKPPKYT VSYNMQHTCK PKETQEIPFV MDSSAITNTS CSTNIVSSTY SSNEILPLQV 120 EEMEQDCLME SMLLSSEPRE EVNATHEDLL RSSLAALDFD WGWHDELIAF EAFGNVML |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 8e-14 | 18 | 80 | 10 | 69 | OsWRKY45 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020575342.1 | 1e-134 | probable WRKY transcription factor 70 | ||||
TrEMBL | A0A2I0WQZ0 | 1e-60 | A0A2I0WQZ0_9ASPA; Putative WRKY transcription factor 70 | ||||
STRING | XP_008788524.1 | 4e-37 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2032 | 35 | 100 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 1e-18 | WRKY DNA-binding protein 70 |