PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14482
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 296aa    MW: 31969.8 Da    PI: 6.9913
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14482genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00021628123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                + C+ C++sFs+   L  H+r+H
  PEQU_14482  6 HACKLCSRSFSNGRALGGHMRSH 28
                67********************9 PP
2zf-C2H212.20.00056172194123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C+ C+k+F++   L  H  +H
  PEQU_14482 172 FQCGTCKKVFRSYQALGGHRASH 194
                 89**********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.034629IPR007087Zinc finger, C2H2
PfamPF139125.1E-7628IPR007087Zinc finger, C2H2
SMARTSM003550.032628IPR015880Zinc finger, C2H2-like
SuperFamilySSF576672.71E-8628No hitNo description
PROSITE patternPS000280828IPR007087Zinc finger, C2H2
SuperFamilySSF576672.71E-8167194No hitNo description
PROSITE profilePS5015710.221172199IPR007087Zinc finger, C2H2
PfamPF139121.2E-10172196IPR007087Zinc finger, C2H2
SMARTSM003550.17172194IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280174194IPR007087Zinc finger, C2H2
PfamPF139129.7E-10221244IPR007087Zinc finger, C2H2
PROSITE profilePS501578.538222244IPR007087Zinc finger, C2H2
SMARTSM003550.67222244IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280224244IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
LSMEKHACKL CSRSFSNGRA LGGHMRSHAV AVAAAASAKS LLSDYSSSST SSHEAEEGKG  60
LSYGLRENPK KSFRMVDPEF SSSVVQDRES ETESSPITIN RRRNKRPAPE LPEAEQLSSV  120
SDTTPEEDVA ISLMLLSRDV WSKDEEDEEG RELVTMVNLK TKSSPAKGRS RFQCGTCKKV  180
FRSYQALGGH RASHKKSRSC FPPANIEGST EAIADGEGKS VHVCPICFRE FDSGQALGGH  240
KRSHLLSSTA NITIISPPPV AKLNESLFDL NLPAPLDDVA ELSAISEAGF MTSSPV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020584016.10.0zinc finger protein ZAT4-like
TrEMBLA0A2I0AVM31e-98A0A2I0AVM3_9ASPA; Zinc finger protein ZAT4
STRINGXP_008787063.11e-85(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35183377
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.12e-46C2H2-like zinc finger protein