PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_13631 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | C2H2 | ||||||||
Protein Properties | Length: 171aa MW: 18219.6 Da PI: 8.6243 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.2 | 0.00055 | 88 | 110 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C k+F + L H r+H PEQU_13631 88 HQCLICWKTFATGQALGGHKRRH 110 79*******************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00355 | 0.035 | 39 | 61 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.515 | 39 | 61 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 2.8E-11 | 39 | 63 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 1.78E-8 | 39 | 110 | No hit | No description |
PROSITE pattern | PS00028 | 0 | 41 | 61 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.39 | 88 | 110 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF13912 | 4.0E-8 | 88 | 110 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 8.767 | 88 | 110 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 90 | 110 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence Send to blast |
MEGFRGSQSE EEYLALCLLS LARHASPAFS HTPPPTLDHK CSLCAKAFAS YQALGGHMTS 60 HRKPIGDNRL FSGSQPAASS SSDGAKGHQC LICWKTFATG QALGGHKRRH FDGTIGSAVG 120 KGSAATSGVF RGFDLNLPPV MELGRQCWGL EDEEAVQSPN PVKRPRLSII A |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020579179.1 | 1e-122 | zinc finger protein AZF3-like | ||||
TrEMBL | A0A2I0X1P6 | 2e-61 | A0A2I0X1P6_9ASPA; Zinc finger protein ZAT10 | ||||
STRING | XP_008792675.1 | 3e-37 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1022 | 36 | 113 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 8e-36 | salt tolerance zinc finger |