PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_12050
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 239aa    MW: 25197.5 Da    PI: 7.6455
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_12050genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.91.8e-0583105123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C+ CgksF++   L  H+ +H
  PEQU_12050  83 HPCSVCGKSFPSYQALGGHMASH 105
                 78******************999 PP
2zf-C2H211.90.00068136158123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C +C k+F++   L  H r+H
  PEQU_12050 136 HQCLICLKTFPTGQALGGHKRRH 158
                 79*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.69983110IPR007087Zinc finger, C2H2
PfamPF139121.6E-1483107IPR007087Zinc finger, C2H2
SuperFamilySSF576671.65E-883158No hitNo description
SMARTSM003550.001883105IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028085105IPR007087Zinc finger, C2H2
PfamPF139121.9E-11135160IPR007087Zinc finger, C2H2
SMARTSM003550.45136158IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280138158IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MAIESLKAAL PPPSPTPAYS STSSDESHLL HVESWTKRKR SKRHPRFFDH PPSEEEYLAF  60
CLLMLSQPPP PYLGVPPLQK MDHPCSVCGK SFPSYQALGG HMASHRKPLP SAAAAGDSGS  120
PAASMVSSSS ANGKVHQCLI CLKTFPTGQA LGGHKRRHYD GTIGSAVGAG SGTGTSGGGA  180
SSASSEAASG GQRGFGLDLN MPPMIEFAFD VSRQFLEADE EDEVQSPLPF KKPHLLLMG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020676776.15e-94zinc finger protein ZAT10-like
TrEMBLA0A2I0WHA41e-92A0A2I0WHA4_9ASPA; Zinc finger protein ZAT10
STRINGXP_008792675.13e-69(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP102236113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.13e-38salt tolerance zinc finger