PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_06050
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 209aa    MW: 23731.3 Da    PI: 6.249
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_06050genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.12.4e-30105163159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDg++WrKYG+K vk+s++pr+YYrC+s+gC vkk+ver+++d+++v+++Yeg+Hnhe
  PEQU_06050 105 LDDGFKWRKYGKKAVKNSPNPRNYYRCASSGCGVKKRVERDRNDQRYVITIYEGTHNHE 163
                 59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-3293165IPR003657WRKY domain
SuperFamilySSF1182903.14E-2797165IPR003657WRKY domain
PROSITE profilePS5081131.433100165IPR003657WRKY domain
SMARTSM007741.4E-33105164IPR003657WRKY domain
PfamPF031063.1E-24106163IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MAALLEFTDQ TTNLSSFHFP EFYSDGQQEL NVYDYAGADE AHLFDESCLT FAGDPEAAAT  60
SVLIATKLVG GERRGAEENN EEVKRRKVEA EFRIGFRTKS EVEILDDGFK WRKYGKKAVK  120
NSPNPRNYYR CASSGCGVKK RVERDRNDQR YVITIYEGTH NHESPDIIRH PFITYEIASN  180
SSSWANSCAQ MMPAMATNFT WSSKFAPHT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-2795165777Probable WRKY transcription factor 4
2lex_A6e-2795165777Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00531DAPTransfer from AT5G26170Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020573832.11e-158probable WRKY transcription factor 50
TrEMBLA0A2I0VH837e-59A0A2I0VH83_9ASPA; Putative WRKY transcription factor 50
STRINGXP_008793281.12e-46(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44137206
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.16e-38WRKY DNA-binding protein 50