PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_01920
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GRF
Protein Properties Length: 429aa    MW: 46481 Da    PI: 7.6151
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_01920genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC71.59.6e-2375119145
         WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                 d+epgrC RtDGKkWRCsr++++++k+CErHl+r r+rsrk++e+
  PEQU_01920  75 DPEPGRCHRTDGKKWRCSRDAIADQKYCERHLNRVRHRSRKHVEA 119
                 79****************************************986 PP
2QLQ48.92e-171046137
         QLQ  1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
                ++FT++Q+ +L++Qil+y+y+ a++P+P+ Ll +i++
  PEQU_01920 10 GPFTPSQWVELEHQILIYQYIDAKVPIPSSLLIPIRR 46
                59*********************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009514.6E-91046IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166619.7451146IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088805.1E-121145IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.20575119IPR014977WRC domain
PfamPF088797.7E-1976118IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008285Biological Processnegative regulation of cell proliferation
GO:0048364Biological Processroot development
GO:0048366Biological Processleaf development
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MLGIVAGMRG PFTPSQWVEL EHQILIYQYI DAKVPIPSSL LIPIRRSLNL SVFPIYSAVS  60
SAWGTFHPGF SGSSDPEPGR CHRTDGKKWR CSRDAIADQK YCERHLNRVR HRSRKHVEAH  120
NGRATKAAIP AVTSTQSASA ASGDNSSNNL TIAQQHRTSF QPSMTKQSPV QCNRLPTKKE  180
ITSEGVQSSG GLPMLPNLSP KSRGTLLPIL KQQKPYEGTS APADFGLICT DPAVNLQGTS  240
HSESISFAVP DSEINDLPSS SHYLVHFFDD LPNNPSECST LAWSDVDEMQ SDRTQLSISI  300
PMPLSDKSSS SSPNHVKQPI SPLRHSCDFN TLGDSSQRYP NWVPISWEPS IGGPLGEVLT  360
NKSTTAKDLS GNLISSSSMS LLLIDGWSSN PMVDSSPTAV LQKTSFGSLS SSGGSSPRAE  420
IEKDGRNET
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020596367.10.0growth-regulating factor 6-like
TrEMBLA0A1D1XFA31e-133A0A1D1XFA3_9ARAE; Putative transporter C36.03c
TrEMBLA0A2H3XY571e-132A0A2H3XY57_PHODC; growth-regulating factor 6-like
STRINGXP_008790288.11e-133(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP42903568
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37740.18e-58growth-regulating factor 2