PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s816181g002
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family WRKY
Protein Properties Length: 306aa    MW: 33708.7 Da    PI: 5.9139
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s816181g002genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY68.31.1e-21123184259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S.SSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa.edpkvveitYegeHnhe 59 
                        +Dg++WrKYGqK++ +s+fprsYYrCt++   gCp+ k v++++ +dp + ++tY  +H ++
  PDK_30s816181g002 123 HDGHEWRKYGQKKILSSDFPRSYYRCTHRddqGCPAAKLVQQKDcNDPPMYVVTYIRHHACK 184
                        7***************************99999*******976548*************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.2E-23113184IPR003657WRKY domain
SuperFamilySSF1182906.8E-22114184IPR003657WRKY domain
SMARTSM007741.3E-30122185IPR003657WRKY domain
PfamPF031063.7E-23124184IPR003657WRKY domain
PROSITE profilePS5081116.857124181IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MASPSMKKPT SDREAAIQEV VRGRELAARL HSLLSVDPRR ELVHGLMEEV SQSFTRALSL  60
LKPTGISEAI QELASMEEDS VCSGNQGSEA SGEKVRTSPH AKGVHSRRRP LQSWTIFTST  120
PHHDGHEWRK YGQKKILSSD FPRSYYRCTH RDDQGCPAAK LVQQKDCNDP PMYVVTYIRH  180
HACKKGLPTP QLPVNCSPSE PCMLSFGSDW SGIKQVQSLL SSFNSTGEGH MGDDVISAKF  240
DAISSSNDPP SLDLTTLESL DPAGDDMLSG MSFSPNSDGF DKHLLMDPWN LDGLGFGDDS  300
WSFLEV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-161241841069OsWRKY45
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017697073.10.0probable WRKY transcription factor 70
TrEMBLA0A2H3ZLP20.0A0A2H3ZLP2_PHODC; probable WRKY transcription factor 70
STRINGXP_008782778.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP203235100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.16e-26WRKY DNA-binding protein 70