PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s689431g003 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | WRKY | ||||||||
Protein Properties | Length: 117aa MW: 13034.8 Da PI: 10.2696 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 33.1 | 1.1e-10 | 90 | 111 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDg++WrKYG+K+vk+s++pr PDK_30s689431g003 90 LDDGFKWRKYGKKSVKSSPNPR 111 59*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.4E-11 | 77 | 111 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.18E-8 | 82 | 111 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 13.115 | 85 | 111 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.6E-6 | 91 | 111 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 117 aa Download sequence Send to blast |
MAYFPSERSD WRAIAMSMAF GHHSGWPRVM NASDYMLYDE ASAACQLERP VPLMARGSSS 60 SRVSGSGMQT PKEQGVSRVA FRTKSEIDIL DDGFKWRKYG KKSVKSSPNP RLVISSP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008808914.1 | 6e-78 | probable WRKY transcription factor 51 | ||||
TrEMBL | A0A2H3Z609 | 1e-76 | A0A2H3Z609_PHODC; probable WRKY transcription factor 51 | ||||
STRING | XP_008808914.1 | 2e-77 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP441 | 37 | 206 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 5e-15 | WRKY DNA-binding protein 50 |