PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1093121g001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bZIP
Protein Properties Length: 492aa    MW: 54662.9 Da    PI: 7.6354
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1093121g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.36.7e-13208269162
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                         e+e kr  r+++NRe+A+ sRqRKk ++eeLeekvk + +   +L  +++ +  e a+l+++
  PDK_30s1093121g001 208 EEEEKRKARLMRNRESAQLSRQRKKHYVEELEEKVKLMHSTINELNTKISYIMAENANLRQQ 269
                         6899*************************************99***************9997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF150034.0E-272086IPR028346HAUS augmin-like complex subunit 2
SMARTSM003382.7E-15208272IPR004827Basic-leucine zipper domain
PfamPF001701.3E-11208270IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.726210270IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-16212270No hitNo description
SuperFamilySSF579592.06E-12212270No hitNo description
CDDcd147043.99E-19213264No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0031023Biological Processmicrotubule organizing center organization
GO:0051225Biological Processspindle assembly
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    Send to blast
LSGESSFKEI LSLNIFLNMK QFSELLLKAA SDYGALTTSV ADLQWSQNFR ESPSVWGEML  60
RPIPAALASC TRFFEAMSAM RDSFATLQQL RVGHSSSPMT LSDSSGGDSR FLTPSQWREG  120
TMSSGDPIVD NWRQEAEGRV EEGDAGDGIN QRSQELKLED ENSRWNLKRK QDGEDGCPNP  180
IANPNLRNSK YQRSEQGNCA SAFNAGCEEE EKRKARLMRN RESAQLSRQR KKHYVEELEE  240
KVKLMHSTIN ELNTKISYIM AENANLRQQL GGSSANCPPP GVYPPPPMAP MHFPWIPGYA  300
VRPQGSQVPL VPIPKLKPQQ PASASRAKKS ESKKNESKVK KVASVSLLGL LFILLFFRSI  360
VPGVTPRYGG DRDEVFGELG VAKDGIFGRS KGSILSVNGR GSGVNSTDEI GLCNGKMDLG  420
EGGVDWVTRR RCETGVDGSV FKIGLPCENF RYIFDYTAFS SEYFLCLRTC MMLYDEMEQS  480
LGHIFIAMPL FN
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22084314}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000269|PubMed:22084314}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008810348.10.0bZIP transcription factor 39-like
SwissprotQ6AU902e-52BZP39_ORYSJ; bZIP transcription factor 39
TrEMBLA0A2H3Z9350.0A0A2H3Z935_PHODC; bZIP transcription factor 39-like
STRINGXP_008810348.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82283545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.16e-39bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Cheng CH, et al.
    A fine physical map of the rice chromosome 5.
    Mol. Genet. Genomics, 2005. 274(4): p. 337-45
    [PMID:16261349]
  3. Takahashi H,Kawakatsu T,Wakasa Y,Hayashi S,Takaiwa F
    A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response.
    Plant Cell Physiol., 2012. 53(1): p. 144-53
    [PMID:22084314]
  4. Ohta M, et al.
    Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants.
    J. Exp. Bot., 2013. 64(18): p. 5429-41
    [PMID:24153418]
  5. Cheng Q, et al.
    An alternatively spliced heat shock transcription factor, OsHSFA2dI, functions in the heat stress-induced unfolded protein response in rice.
    Plant Biol (Stuttg), 2015. 17(2): p. 419-29
    [PMID:25255693]