PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s1093121g001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | bZIP | ||||||||
Protein Properties | Length: 492aa MW: 54662.9 Da PI: 7.6354 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.3 | 6.7e-13 | 208 | 269 | 1 | 62 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e+e kr r+++NRe+A+ sRqRKk ++eeLeekvk + + +L +++ + e a+l+++ PDK_30s1093121g001 208 EEEEKRKARLMRNRESAQLSRQRKKHYVEELEEKVKLMHSTINELNTKISYIMAENANLRQQ 269 6899*************************************99***************9997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF15003 | 4.0E-27 | 20 | 86 | IPR028346 | HAUS augmin-like complex subunit 2 |
SMART | SM00338 | 2.7E-15 | 208 | 272 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.3E-11 | 208 | 270 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.726 | 210 | 270 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.6E-16 | 212 | 270 | No hit | No description |
SuperFamily | SSF57959 | 2.06E-12 | 212 | 270 | No hit | No description |
CDD | cd14704 | 3.99E-19 | 213 | 264 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0031023 | Biological Process | microtubule organizing center organization | ||||
GO:0051225 | Biological Process | spindle assembly | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 492 aa Download sequence Send to blast |
LSGESSFKEI LSLNIFLNMK QFSELLLKAA SDYGALTTSV ADLQWSQNFR ESPSVWGEML 60 RPIPAALASC TRFFEAMSAM RDSFATLQQL RVGHSSSPMT LSDSSGGDSR FLTPSQWREG 120 TMSSGDPIVD NWRQEAEGRV EEGDAGDGIN QRSQELKLED ENSRWNLKRK QDGEDGCPNP 180 IANPNLRNSK YQRSEQGNCA SAFNAGCEEE EKRKARLMRN RESAQLSRQR KKHYVEELEE 240 KVKLMHSTIN ELNTKISYIM AENANLRQQL GGSSANCPPP GVYPPPPMAP MHFPWIPGYA 300 VRPQGSQVPL VPIPKLKPQQ PASASRAKKS ESKKNESKVK KVASVSLLGL LFILLFFRSI 360 VPGVTPRYGG DRDEVFGELG VAKDGIFGRS KGSILSVNGR GSGVNSTDEI GLCNGKMDLG 420 EGGVDWVTRR RCETGVDGSV FKIGLPCENF RYIFDYTAFS SEYFLCLRTC MMLYDEMEQS 480 LGHIFIAMPL FN |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22084314}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000269|PubMed:22084314}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008810348.1 | 0.0 | bZIP transcription factor 39-like | ||||
Swissprot | Q6AU90 | 2e-52 | BZP39_ORYSJ; bZIP transcription factor 39 | ||||
TrEMBL | A0A2H3Z935 | 0.0 | A0A2H3Z935_PHODC; bZIP transcription factor 39-like | ||||
STRING | XP_008810348.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP8228 | 35 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 6e-39 | bZIP family protein |
Publications ? help Back to Top | |||
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