PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100087930001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 394aa    MW: 43110.7 Da    PI: 7.5566
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100087930001genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.6e-11327371654
                                   HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                           HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                   +++Er RR +i +++ +L+e++P+      k  + +++L +Av+YIk+L
  Ote100087930001|100087930001 327 SIAERVRRTKISERMRKLQEVVPNM----EKQTNTSDMLDLAVDYIKEL 371
                                   689*********************6....4679**************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.551321371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.37E-15324383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.59E-11325376No hitNo description
Gene3DG3DSA:4.10.280.106.4E-14326385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.4E-8327371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-11327377IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MNNHEQFQQN TQMGIGSGLT RYRSAPSSYF ASFTSSDGGF GEYDFAQLFN PRASSPETQL  60
IFSRFMNGSG ATQQTCPSNM APPPQQNPAL LQRQSDDYSS ASQIMYANHT SEAAPDSAAV  120
DGAFASFNSN CAAAAQRKME RPAPLIRHSS SPAGLFAKIN IENEFKTMRG VGSYGGGISA  180
NAEASFSSGS KLTRRMDYSS RHASSGMMDP IQEIGSKGMG ENAVDDEDHG NDVEYITGLP  240
ANSWDDSALM SDHYLNGVAN NDSKSFYSAN ASDDQKSEAS DRPKTLLSHH LSLPKSSAEL  300
SAMEKLLQDS VPCKIRAKRG CATHPRSIAE RVRRTKISER MRKLQEVVPN MEKQTNTSDM  360
LDLAVDYIKE LRRQVKMLSD NQANCNCSAK RRRS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00646PBMTransfer from LOC_Os08g39630Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080320.11e-152transcription factor bHLH130
TrEMBLA0A0H3YC401e-153A0A0H3YC40_SALMI; Basic helix-loop-helix transcription factor
STRINGMigut.D00568.1.p1e-113(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46052239