PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OPUNC08G16670.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 237aa MW: 25220.1 Da PI: 7.0554 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.5 | 1.2e-12 | 129 | 189 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e +r rr+ +NRe+ArrsR RK+ ++ eL + v+ L + N++L +el++ +a ++ e+ OPUNC08G16670.1 129 EEERRRRMVSNRESARRSRMRKQRQLSELWTQVEHLRGANRRLLDELNRALRGCADVRREN 189 66899*******************************************9888887776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.7E-9 | 126 | 180 | No hit | No description |
SMART | SM00338 | 3.6E-12 | 127 | 191 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.611 | 129 | 192 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.2E-9 | 131 | 187 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 9.19E-17 | 132 | 180 | No hit | No description |
SuperFamily | SSF57959 | 1.88E-10 | 132 | 179 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 134 | 149 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence Send to blast |
MYHHHGGHGE VASLHFLSPP NPPFFGAAAR HHHHGLINMA LPPQAYLVPA GPPPPPPLFQ 60 EATAALAAGD DDDAMAVFEL ERILGEAAAG RLGSGGGGGG GGSNGSPSSG SDGGGVCCYG 120 LQDVAPAAEE ERRRRMVSNR ESARRSRMRK QRQLSELWTQ VEHLRGANRR LLDELNRALR 180 GCADVRRENS RLRDEKAELV EKLQLLLPQP PAAASSNDQS SCSSEPCKNS TTTTAAE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 143 | 150 | RRSRMRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP004376 | 1e-152 | AP004376.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0481F05. | |||
GenBank | AP004557 | 1e-152 | AP004557.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0028A08. | |||
GenBank | AP014964 | 1e-152 | AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015649077.1 | 6e-89 | bZIP transcription factor RISBZ3-like | ||||
TrEMBL | A0A0E0LW70 | 1e-171 | A0A0E0LW70_ORYPU; Uncharacterized protein | ||||
STRING | OPUNC08G16670.1 | 1e-171 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 1e-16 | basic leucine-zipper 42 |