PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OPUNC07G09120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 582aa MW: 62160.9 Da PI: 3.8746 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 73.8 | 4.4e-23 | 12 | 128 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 lppG++F+Ptd+elv ++L +++g++l+l+ vi ++d +++ Pw+L ++ +++ +e +fF++++ k+ +g+r++r + g W+ g+ e+ OPUNC07G09120.1 12 LPPGLKFDPTDDELVARFLLGHLQGEPLPLHGVILDADPLSAPPWKLLAE-HGRGDEGFFFAEARAKNGKGSRQKRtVEGGGLWQ--GQRVEI- 101 79****************************99***************744.4567799******************4455889*8..554445. PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + k +L f+ ++ ++g ++ Wvmhey++ OPUNC07G09120.1 102 ------AWRKYMLSFF-AEGERG-SSGWVMHEYAI 128 ......468999****.444454.89*******86 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.18E-29 | 11 | 147 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 22.225 | 12 | 147 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.8E-14 | 13 | 127 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 582 aa Download sequence Send to blast |
MAAGGGGVGD GLPPGLKFDP TDDELVARFL LGHLQGEPLP LHGVILDADP LSAPPWKLLA 60 EHGRGDEGFF FAEARAKNGK GSRQKRTVEG GGLWQGQRVE IAWRKYMLSF FAEGERGSSG 120 WVMHEYAITS PAELASSPIR LYRVRFSGHG KKRKREPQTD EEGRARAAPQ IAGTDSTLLE 180 EVVPSAAVVE IAADGADHLP DLPAEEAVAG ADAQNYYLSG VMDGEALAVS RRHCPPPSMN 240 SNNETALLDE RVLPPQTPAT TGTGVALLDE VVPPPATVVD DADQGIVMDD SSTVFSHLSD 300 MITLPAEEGD ATGGAALAPT GTTSLDDLYY SLADFEFPQI NMDKLLSCID FSTADPSCLD 360 MEFSMDDLHE PQNTRTEVAL LQELVLPPQP VPVPLATLVE VADSSDCANQ GCSGVMHYSS 420 VVFTHLSDMI VLPEEEEADA TDGAAPALAG TMSLDYQNYS LSDFEERVPV VDVASDADGA 480 DQCSSIHPKV FSHLEDLITL PAEEADQADA CSAAPAPSLD NQNYSSLGVI DSEAPALSDF 540 EFPETIDEVL NSIDFTMADR SCLDMEMEFS MDDLLDFDLP AD |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | CP012615 | 1e-172 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0E0LJ85 | 0.0 | A0A0E0LJ85_ORYPU; Uncharacterized protein | ||||
STRING | OPUNC07G09120.1 | 0.0 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP802 | 22 | 137 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G17260.1 | 3e-11 | NAC domain containing protein 86 |