PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G00750.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 283aa    MW: 29517.9 Da    PI: 6.2276
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G00750.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY45.51.5e-141321702159
                      -EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY  21 prsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       +sYYrCt ++C+vkk+vers++dp+vv++tYeg+H h+
  OPUNC07G00750.1 132 RKSYYRCTNSKCTVKKRVERSSDDPSVVITTYEGQHCHH 170
                      57**********************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.8E-16110171IPR003657WRKY domain
SuperFamilySSF1182907.32E-17117170IPR003657WRKY domain
PROSITE profilePS5081117.224120172IPR003657WRKY domain
SMARTSM007743.6E-18125171IPR003657WRKY domain
PfamPF031064.1E-11133170IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MAMEGAGDWP FAADEAYADS SAIFAELGWA NGLAVVGAVG ELLPPLDPPG EATPPPLDPP  60
ETPAGSSADG AASSCSTDDG ADGGKPVAAS TEAASKSLTP GKKGGKKRAR QPRFAFMTKS  120
EIDHLEDGYR WRKSYYRCTN SKCTVKKRVE RSSDDPSVVI TTYEGQHCHH TVTFPRGGAA  180
TGSFSHIHTM VAAAALAAPA FSAHQQLYSN LQHQPPATTM PLAAAATTPV ASPSLLQLPL  240
HCNQELQVVA SCSDYPSSSS SPASVPVDRG LLDDMVPRAM RNG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-14115169774Probable WRKY transcription factor 4
2lex_A2e-14115169774Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2409581e-140AK240958.1 Oryza sativa Japonica Group cDNA, clone: J065045F23, full insert sequence.
GenBankAY3418581e-140AY341858.1 Oryza sativa (japonica cultivar-group) WRKY18 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645717.11e-131probable WRKY transcription factor 57
TrEMBLA0A0E0LG980.0A0A0E0LG98_ORYPU; Uncharacterized protein
STRINGOPUNC07G00750.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21253796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.23e-44WRKY DNA-binding protein 57